| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3316 |
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| Symbol | |
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| ID | 5707183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 3826315 |
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| End bp | 3828453 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641272743 |
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| Product | transketolase |
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| Protein accession | YP_001538110 |
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| Protein GI | 159038857 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00210127 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCTGACA ACCGACCCGA GCTTCCTACA CTGAACTGGT CCGACCTCGA CCGTCGGGCT
GTCGACACGG TCCGCGTACT GGCCATGGAC GCCGTGGAGA AATCCGGCAA CGGCCACCCA
GGCACCGCGA TGAGCCTCGC GCCCGTGGCC TACCTGCTCT TCAACCGAGT GCTGCGCCAC
AACCCCGCCG ATCCGACCTG GCCCGGCCGA GACCGCTTCG TGCTGTCCGC CGGGCACTCC
AGCCTCAGCC TCTACATCCA GCTCTTCTTC GCCGGCTACC CGTTGAGCCT GTCCGACCTG
GAGGCACTTC GGCAGTGGGG CTCACTCACC CCGGGCCACC CCGAGTACGG GCACACCCCG
GGTGTGGAGA CCACCACCGG CCCGCTCGGA CAGGGCCTCG GCAACGCCGT CGGAATGGCG
ATGGCCGCCC GCCGCGAGCG CGGCCTGTTC GACCCCGAGC CGGAGCCGGG CAGTTCAGTC
TTCGACCATG ACATCTGGTG TATCGCCTCC GACGGTGACA TCGAGGAGGG CCTCAGCCAC
GAGGCCAGCG CCCTCGCCGC CCACCAGCAG CTGGGCAACC TCTGTGTGAT CTACGACGAC
AACGAGATCT CGATCGAGGA CGACACCCGG ATCGCCAAGA GCGAGGACAT CGTGGCCCGG
TACGAGGCGT ACGGGTGGCA CGTACAGACG GTCGACTGGC GACGCGGCGA CGCGGACCAG
GACGACTACC ACGAGGACGT GGCCACGCTG TACCGGGCGC TGCTGGCCGC GCGGGCCGAG
ACCGGCCGTC CCTCGTTCAT CGCGCTGCGC ACCATCATCG GCTGGCCGGC ACCGAACAAG
CGGAACACCG GCAAGATCCA CGGTTCGGCA CTCGGTGCCG ACGAGGTCGC CGCGACGAAG
GAACTCCTCG GCTTCGACCC ACAGCGCACC TTCGAGGTCG ACGAGGACGT GCTCAAGCAC
ACCCGCCAGG TGCTGGAACG CGGCATGGCG GCCCAGCGCG AGTGGACCGA GACGTTCGAC
GCCTGGGGGC AGGCGAACCC GGAACGCAAG GCACTCTGGG ACCGGATGGC CACCCGGACG
CTGCCCCGAG GCTGGACGGA CGCGCTTCCC GCGTTCCCCG CCGACGCGAA GGGCATCGCC
ACCCGCGCTG CCTCCGGCAA GGTCCTCACC GCGCTCGCAC CGGTCCTGCC GGAGCTGTGG
GGCGGCTCGG CCGACCTCGC GGAGAGCAAC AACACCACCA TGAAGGGTGA ACCGTCCTTC
ATCCCGGCCG AGCACGCCAC CAAGGACTTC CCCGGCAACG AGTACGGCCG CACGCTGCAC
TTCGGCATTC GTGAGCACGC GATGGCAGCC ATCCTCAACG GGATCGCCCT GCACGGTGGC
ACCCGCCCGT ACGGTGGCAC GTTCCTTGTC TTCAGCGACT ACATGCGCCC CTCGGTACGC
CTCGCGGCGA TGATGAAGCT GCCGGTGATC TACGTCTGGA CGCACGACTC GATCGGCCTC
GGCGAGGACG GCCCGACCCA CCAGCCGGTG GAGCACCTGA CCTCGCTGCG GGCGATACCG
GGCCTGGACG TGGTGCGCCC CGCGGACGCG AACGAGACCG CCTGGGCGTG GCGGCAGGCC
CTGACGCACA CCGACCGGCC GACCGCGTTG GCGCTGAGCC GCCAGCCGTT GCCGACCCTG
GACCGGTCCG TGCTCAACAG CGCGGAGGGG GTGGCCCGCG GCGGCTACGT GCTGGCCGAG
GCGTCCAGCG GCAAACCGCA GGTGATCCTC CTCGGCACCG GCTCCGAGGT GCAGCTCTGC
CTCACCGCCC GGGAACGGCT GGAGGCCGAC GGCACCCCCA CCCGGGTCGT GTCCATGCCC
TGTCAGGAGT GGTTCCACGC CCAGGACGAG GCGTACCGGG AGTCGGTTCT GCCGCGCGGG
GTAAGGGCAC GGGTGAGCGT GGAGGCGGGC GTCGCGATGT CCTGGCGGGC CCTCGTCGGA
GACTGCGGCG AGAGCATCAG TCTGGAGCAC TTCGGGGCGA GCGCCCCGCA CAACGTGCTC
TTCGAGCAGT TCGGCTTCAC CCCGGACCGG ATCGTGGGCG CGGCGCACGC CGCGCTGACC
CGGGTCGGCG ACATCACCGG TAATCCGACC GGCAACTGA
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| Protein sequence | MADNRPELPT LNWSDLDRRA VDTVRVLAMD AVEKSGNGHP GTAMSLAPVA YLLFNRVLRH
NPADPTWPGR DRFVLSAGHS SLSLYIQLFF AGYPLSLSDL EALRQWGSLT PGHPEYGHTP
GVETTTGPLG QGLGNAVGMA MAARRERGLF DPEPEPGSSV FDHDIWCIAS DGDIEEGLSH
EASALAAHQQ LGNLCVIYDD NEISIEDDTR IAKSEDIVAR YEAYGWHVQT VDWRRGDADQ
DDYHEDVATL YRALLAARAE TGRPSFIALR TIIGWPAPNK RNTGKIHGSA LGADEVAATK
ELLGFDPQRT FEVDEDVLKH TRQVLERGMA AQREWTETFD AWGQANPERK ALWDRMATRT
LPRGWTDALP AFPADAKGIA TRAASGKVLT ALAPVLPELW GGSADLAESN NTTMKGEPSF
IPAEHATKDF PGNEYGRTLH FGIREHAMAA ILNGIALHGG TRPYGGTFLV FSDYMRPSVR
LAAMMKLPVI YVWTHDSIGL GEDGPTHQPV EHLTSLRAIP GLDVVRPADA NETAWAWRQA
LTHTDRPTAL ALSRQPLPTL DRSVLNSAEG VARGGYVLAE ASSGKPQVIL LGTGSEVQLC
LTARERLEAD GTPTRVVSMP CQEWFHAQDE AYRESVLPRG VRARVSVEAG VAMSWRALVG
DCGESISLEH FGASAPHNVL FEQFGFTPDR IVGAAHAALT RVGDITGNPT GN
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