Gene Sare_3307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3307 
Symbol 
ID5703661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3817785 
End bp3818558 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content69% 
IMG OID641272734 
ProductFeS assembly ATPase SufC 
Protein accessionYP_001538101 
Protein GI159038848 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component 
TIGRFAM ID[TIGR01978] FeS assembly ATPase SufC 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000620228 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCACCC TGGAGATCCG TGACCTGCAG GTGTCGGTCA AGCTGCCCGA GGGTGAGCTC 
AAGCCGATCC TGCACGGTGT CGACCTGACC GTCCGGTCGG GGGAGACGCA CGCCATCATG
GGCCCGAACG GCTCCGGTAA GTCCACCCTG GCCTACTCGG TCGCCGGCCA CCCGAAGTAC
GAGATCACCG GTGGTTCGGT GACCCTCGAC GGCGCGGACG TCCTGGCGAT GTCCGTCGAC
GAGCGGGCCC GTGCCGGGCT CTTCCTGGCC ATGCAGTACC CGGTCGAGGT TCCCGGGGTG
TCGGTGGCGA ACTTCCTGCG GACCGCCAAG ACCGCGATCG ACGGTGCGGC ACCGAAGCTG
CGCACCTGGG GTGGCGAGCT GCGGGGGGCC ATGGAGCGCC TCCAGATGGA CCCGGCGTTC
GCCCAGCGTA ACGTCAACGA GGGCTTCTCC GGTGGGGAGA AGAAGCGGCA CGAGATCGTG
CAGCTGGAGC TGCTCAAGCC GAAGGTGGCG ATCCTCGACG AGACCGACTC GGGCCTCGAC
GTCGACGCGC TCCGCGTGGT CAGCCAGGGC GTCAACCGGG TCCGTGAGAC CGGTGACACC
GGCCTGCTGC TGATCACCCA CTACACCCGG ATCCTGCGGT ACATCAAGCC GGACCACGTG
CACGTGTTCG TCGCCGGCCG GATCGTCGAG GAGGGCGGCC CGGAGCTGGC CGACAAGCTC
GAGGACGAGG GCTACGAGCG ATACGTCGCC GGGGCGGGCT CGGCGCGGGC CTGA
 
Protein sequence
MSTLEIRDLQ VSVKLPEGEL KPILHGVDLT VRSGETHAIM GPNGSGKSTL AYSVAGHPKY 
EITGGSVTLD GADVLAMSVD ERARAGLFLA MQYPVEVPGV SVANFLRTAK TAIDGAAPKL
RTWGGELRGA MERLQMDPAF AQRNVNEGFS GGEKKRHEIV QLELLKPKVA ILDETDSGLD
VDALRVVSQG VNRVRETGDT GLLLITHYTR ILRYIKPDHV HVFVAGRIVE EGGPELADKL
EDEGYERYVA GAGSARA