| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3291 |
|---|
| Symbol | |
|---|
| ID | 5706908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 3802832 |
|---|
| End bp | 3803758 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641272718 |
|---|
| Product | protein of unknown function RIO1 |
|---|
| Protein accession | YP_001538085 |
|---|
| Protein GI | 159038832 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1718] Serine/threonine protein kinase involved in cell cycle control |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00160109 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCGCGATC ACGACTTTCC GGCGCCGGAG CGCCGTACCC GCGGCAGACG CCGCTTCGAC
GATGACGAAC CACACCTCGC CAAGCGCGGG CGGAAGGCCG AACCGCAGCC CGTTGACCTC
GACCCGCTGC CGGACGCCGG GACCTGGTCG TCCTGGGACG ACGCGGTCCA CGGTCCGCGA
CCGTACCCCG CCTGGCTGGT AACGGAGCTG GCCGCCAGAG ACACCGAGCT GGGCGTGCTC
AAGACCGGCA AGGAGGCGGA CGTCCATCTC GTCCGTCGCG CCGTTCCCGA CACCGATCGG
TCCTGCCTGC TCGCGGCCAA GCGATACCGC GACGCCGACC ACCGGCTGTT CCACCGGGAC
GCGGGATATC TGGAGGGGCG GCGGGTCCGC CGATCCCGGG AGATGCGGGC GATGACCCGG
CGAACCGCGT TCGGTCGGCA GATGATCGCC GGACAGTGGG CAGCGGCCGA GTTCGCCGTG
CTCGGCCGCC TGTGGGAGAT CGGTGCGCGG TACGGCACGA TCACCGTGCC CTACCCGGTC
CAACTCCGCG GCACCGAGCT GATGCTGGAG TTCCTCGGAG ACCCCGACGA GGGTCTGGCG
GCCCCACGGT TGGCGCAGCT GCGACCGGGG GAGGCGGACC TGCGTGACCT GTGGGGACAA
CTCGTCGAGG CGCTGATGGT ACTCGCCCGA GCCGGCCATG CACACGGAGA CCTGTCGCCC
TACAACCTGC TGGTACACGA AGGGCGCCTG GTGCTCATCG ACCTGCCTCA GGTCGTGGAC
CTGGTCGCCA ACCCGCAGGG ACCGGAGTTC CTGGCCCGGG ACGTGCGGGT GGTCGCCACC
TGGTTCGCCG CCCGTGGCCT GCCGGCGGCG CTGGCCGACC CGCTCGCCCT CACCGAACAG
CTCCTCCGGG AGGCGGGCCT GCGCTGA
|
|---|
| Protein sequence | MRDHDFPAPE RRTRGRRRFD DDEPHLAKRG RKAEPQPVDL DPLPDAGTWS SWDDAVHGPR
PYPAWLVTEL AARDTELGVL KTGKEADVHL VRRAVPDTDR SCLLAAKRYR DADHRLFHRD
AGYLEGRRVR RSREMRAMTR RTAFGRQMIA GQWAAAEFAV LGRLWEIGAR YGTITVPYPV
QLRGTELMLE FLGDPDEGLA APRLAQLRPG EADLRDLWGQ LVEALMVLAR AGHAHGDLSP
YNLLVHEGRL VLIDLPQVVD LVANPQGPEF LARDVRVVAT WFAARGLPAA LADPLALTEQ
LLREAGLR
|
|---|
| |