Gene Sare_3279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3279 
Symbol 
ID5707785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3777816 
End bp3779024 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content72% 
IMG OID641272706 
Productamidohydrolase 
Protein accessionYP_001538073 
Protein GI159038820 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.680166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.157813 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGGA TGAGGCTCAG CCCCGAGGTT CGGCGTCGGT GTCAGGACGC CGTCGACCAG 
GCCCAGGATC GCCTGCTCGC CCTGTCGCGG AGCCTGCACG CGGAGCCGGA GACGGCGTTC
CGGGAGTACC GCAGCGCGGC CAAGGTGAGC GGGCTGCTGC GCGACGAGGG CTTCGCCGTC
GACGTTGGCG TCGGTGGACT CGACACCGCC TTCACCGCCC GGTACGGCGA CGGTCCACTC
GTGGTCGGGC TGTGCGCCGA ATACGACGCG CTGCCGGGAC TCGGCCACGC CTGCGGACAC
AACATCATCG CCGCCTCGTC GGTCGGCGCG GCCCTGGCGC TGCGCGAGGT GGCGGCAGAG
CTCGACCTCA CGGTCGTCGT GGTCGGCACG CCCGCCGAGG AGGAAGGCGG TGGCAAGATC
ACCTTGTTGG AGGCCGGGGT TTTCGACTCG GTCTCGATGG CCATGCTGGT CCACCCGGCC
CCCGAGGACA ACTGTGCACC CCGCCCGCTC GCCCTGGTCG AGCTGGAGGT CACCTACACC
GGACGGGAGT CCCATTCCGC GCTCGCACCG CACCTGGGCG TCAACGCCGC GGACGCGTTG
ACCATCGCCG AGGTCGCAGT GGGCGTCGGG CGTCAGCACT TCGAGCCGCG CCAGCAGGTG
CACGGCATCG TCACCCGCGG CGGTGACGTG CCGAACGTGG TTCCGGCGCA CACTCGTGCC
CTGTACAACC TGCGCGCGGC CGACATGGAG TCCCTGAGCC GGCTGGAGTC GCGGATCCGG
GCCTGCTTCG CCGCCGGCGC GATCGGCACC GGCTGTACCC ATGAGGTCAG CGCCACGCCC
GCGTACGCCG AACTGGTGCA CGATTCCTTC CTGTCCGAGG CGTACCGGTC GGCGGCGACC
GAGTTGGGCC GCCCACTGGT CTCCCGCGAG CAGGAGCTGG AGATGCCCAC CGGCAGTACC
GACATGGGCA ACGTGAGTCG CGCGCTGCCC AGTCTGCAGC CGAGTATCGG GATCAACAGC
GGAGCCGCCG TCAACCACCA GCCCGAGTTC GCCGCGGCGT GTGTGGCACC CGGTGCTGAT
CGGGCGCTGC TGCAGGGCGC CGTCGCGCTC GCCTGGACCG CCGCCCAGGC GGCCCAGGAC
GAGCAAGCCC GCCAGCGGCT GCTGGACCAG CACCGGGAGC GTGGCGCGTC GAAGGTGGGC
CCACGGTAG
 
Protein sequence
MRRMRLSPEV RRRCQDAVDQ AQDRLLALSR SLHAEPETAF REYRSAAKVS GLLRDEGFAV 
DVGVGGLDTA FTARYGDGPL VVGLCAEYDA LPGLGHACGH NIIAASSVGA ALALREVAAE
LDLTVVVVGT PAEEEGGGKI TLLEAGVFDS VSMAMLVHPA PEDNCAPRPL ALVELEVTYT
GRESHSALAP HLGVNAADAL TIAEVAVGVG RQHFEPRQQV HGIVTRGGDV PNVVPAHTRA
LYNLRAADME SLSRLESRIR ACFAAGAIGT GCTHEVSATP AYAELVHDSF LSEAYRSAAT
ELGRPLVSRE QELEMPTGST DMGNVSRALP SLQPSIGINS GAAVNHQPEF AAACVAPGAD
RALLQGAVAL AWTAAQAAQD EQARQRLLDQ HRERGASKVG PR