Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3267 |
Symbol | |
ID | 5707554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 3759407 |
End bp | 3762079 |
Gene Length | 2673 bp |
Protein Length | 890 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641272694 |
Product | tetratricopeptide TPR_4 |
Protein accession | YP_001538061 |
Protein GI | 159038808 |
COG category | [S] Function unknown |
COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.318718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGGCG CCGACCACGT GGATGACAGT CCAGCAGGCA AAGCCCTTCG TGTCGTCACC GACGATCCGG CTCGCGCCAC CGAGATGGCC GAGGCCGCGC TTGCGGCTGC CCGCGCCAGT GACGACCCTG CTGAGGAGAC CCTGGCGCTG CGGGCACTCG GTCTCGCCGC ACTCGAACAA CACAACGCGG AGCAGGCGCT GCGCCACCTG CGCCAGGCCT GTCGGGTGGC CGAGGCGGCG AGGCTTCCCG TCCGCGCCGC CGAAGCCCGG ATGAGCCTGG CGCTGGCCCT TGCCGAGGCC GGCCAACCAC AACAGGCGCT ACGGGAAATC GACGCCGCGT CACCGGCGCT TCATGGGCTA CCCCGCGCAC GCCTGCAGAT GCAGCGGGCA CTGATACTCG ACCGCCTCGG CCACTTCGAC GAGGCGATGG CCGGCTACAC CGACGCCCTG GCCGTGTTTC GACGTGGCCA GGACCGGCTG TGGCAGTCCC GGGCGCTGAC CAACAGAGGG GTCCTGCACA CCTACCGCGG CAGCCTGCGC CAGGCAGAGG CTGACCTGCG GGCGGCGGAG CAGGGCCATG CGGAGCTCGG CCAGGAGTTG GCCCTCGCGC AGGTCCGCCA CAACCTCGGC TTCGTCCTGT CTCGCGCCGG CGACATCCCT GGCGCACTGC GCTGGTACGA CCTGGCCGAC CAGTACTTCG CCCGTACCAC CCGCCCGGCG GTCGCGCTGA TGGATCGGGG TGAACTACTA CTGGGCGCCC GGCTACTGCC GGAGGCTCGC GCGGCGGCCG AGGCTGCCCT CGACGCGGCG CGGGCCAGCC GGATGGGGCT CTACGAGGCG CAGGCCCGAC TGATGCTGGC CGAAGTCGCG CTGGCCGAGG TCGATCTGCC CACCGCCACA AAGCAGGCAC AGGCAGCGTA TCGCCTGTTC AGTCGACAGA ATCGGCCCGC TTGGGCGGCA CTGTCCCGAT ACGTGAAGCT ACGGGCAAGT TCGCCGGACG AACCGGCGCA CCTACGGCAG GCCCGCTCCG TGGCGCGTGC GCTGTCGGCC AGCAGCTGGC CGATACCCGC GCTCGACGCC CGCCTCTACG CCGCCCGAGT GGCCCTGGAC CGGGCACTGC GTACCGGGCA ACGCGCGAAG GCCGCGGCAG TCGCCGGGGA GTTGAGTGCC ATCCGAGCTG CCAGCCGTGG GGGGCCAGCC CAACTCCGGG CCCGCGCCTG GCATGCCGAG GCCCTGCGCC GGATCGCTAC CGGCGACACC GCCGGGGCAC GCCGGGCGCT GAACGCGGGG ATGGTGCTGC TGGACCGCTA CCAGGCGGCC CTCGGCGCCA CGGAGCTGCG GGTGATGGCC GGTGCGTACG CCCTCGAACT GGCCAGCACC GGCCTGCGGC TTGCGGTTCA CGGCGGTCAG GCGCGGGCGA TCCTGCGGTG GAGTGAGCGT TGGCGGGCCG CCGCGCTACG GCTGCCCCCA GCCCGACCCC CGGACGAGGC CGGGCTCGCT GCTGATCTGA CCGAACTGCG CCGAACAGCC GACGAGGCCA CCCGACCGGG TGCCGCGTCA GGAATCACCC TGTTACGCCG TCAGCGGGCG ATAGAGGAGC GGATCCGCGC CCGAAGTTGG CAGGCCAGTG GCACCGAATC CGGTACGGCG AGTGGTATCT CACCGGACCA GGTCGCGGTG GAGCTGGGCG ACCAGACGTT GGTCGAGCTG ATCGACGTCG ACGGAACGCT ACACACCGTC GTGGTGCACC GCGGCCGGTT CCACACCCGG GCGATAGGTG CGCTCGCCAC CATCACCGCC GAACTCCAGG CACTGCGTTT CGCGCTGCGG CGCATCCTGA CCAGGCTCGG CACCGACGAC TCCCAAGCCG CTGCCGCGAC CGCCGCCAAG TATGCGGTTC AGCAGCTGGA CGCGATCCTC TTCGGCAGCA TACGTTCGTG GCTCGGCGAT GGCGGACTGG TCCTGGTGCC GGTCGGCGCG CTCCACGCGA TGCCCTGGGC GCTGCTGCCG ACCTGCGCCG GGCGGCCGGT CACGGTGGTG CCATCAATGT CGGAGTGGCT GACCGCGTCG GCCCGCCGCC AGCCCACCCC GTCGACGACG ACCGGTTCAC CCCACCAACG ACACCCGGTG CTGGTTGCCG GGCCCGGCCT CGCCTTCGCC GAAGCGGAGG TGCAGCGACT GGCGGGAACA CTCGCTCCGG CCGAGGTGCT GCTCGGCCCC GCCGCGACCG CCGAGGCCGC GCTGCAGGCA CTTGACGGTG CTCCACTTGC CCACCTCGCC GCACACGGCA CGTTCCGCTC CGACAACCCC ATGTTCTCGC ACGTACGCCT CGCCGACGGT CCACTGACCG TGTACGACCT GGAGCGGCTG GCCCGAGCGC CGGGCACGGT GGTGCTCTCC GCCTGTGATG TGGGGCTGTC GGCGGTGCAT CCCGGCGAGG AACTGATGGG ACTTTCGGCC GCCCTGCTCC AGCTCGGAAC GGCGACCGTG ATGGCCAGTG TCCTGCCGGC GTTGGACTCC GCGGCACAGG AGCTGATGGT GGAGATGCAC CGGCGGCTGG CCACGGGTGC CACGCCAGGT CGTGCCCTCG CCGGCGCACA GGCGGAATTC GGCGGTGGCC TGGACGCCGG CACCGCGACC GCGGCCTCGT TCGTCTGCTT CGGCGCCGGT TGA
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Protein sequence | MGGADHVDDS PAGKALRVVT DDPARATEMA EAALAAARAS DDPAEETLAL RALGLAALEQ HNAEQALRHL RQACRVAEAA RLPVRAAEAR MSLALALAEA GQPQQALREI DAASPALHGL PRARLQMQRA LILDRLGHFD EAMAGYTDAL AVFRRGQDRL WQSRALTNRG VLHTYRGSLR QAEADLRAAE QGHAELGQEL ALAQVRHNLG FVLSRAGDIP GALRWYDLAD QYFARTTRPA VALMDRGELL LGARLLPEAR AAAEAALDAA RASRMGLYEA QARLMLAEVA LAEVDLPTAT KQAQAAYRLF SRQNRPAWAA LSRYVKLRAS SPDEPAHLRQ ARSVARALSA SSWPIPALDA RLYAARVALD RALRTGQRAK AAAVAGELSA IRAASRGGPA QLRARAWHAE ALRRIATGDT AGARRALNAG MVLLDRYQAA LGATELRVMA GAYALELAST GLRLAVHGGQ ARAILRWSER WRAAALRLPP ARPPDEAGLA ADLTELRRTA DEATRPGAAS GITLLRRQRA IEERIRARSW QASGTESGTA SGISPDQVAV ELGDQTLVEL IDVDGTLHTV VVHRGRFHTR AIGALATITA ELQALRFALR RILTRLGTDD SQAAAATAAK YAVQQLDAIL FGSIRSWLGD GGLVLVPVGA LHAMPWALLP TCAGRPVTVV PSMSEWLTAS ARRQPTPSTT TGSPHQRHPV LVAGPGLAFA EAEVQRLAGT LAPAEVLLGP AATAEAALQA LDGAPLAHLA AHGTFRSDNP MFSHVRLADG PLTVYDLERL ARAPGTVVLS ACDVGLSAVH PGEELMGLSA ALLQLGTATV MASVLPALDS AAQELMVEMH RRLATGATPG RALAGAQAEF GGGLDAGTAT AASFVCFGAG
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