Gene Sare_3257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3257 
Symbol 
ID5703739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3749525 
End bp3750994 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content74% 
IMG OID641272684 
Productmembrane-flanked domain-containing protein 
Protein accessionYP_001538051 
Protein GI159038798 
COG category[S] Function unknown 
COG ID[COG3428] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGC CGGCCGCGTG GGGCCCGGAG GAGGTCCGGC CGACTGGCCC GCAGCCACAC 
CCCGGCGCAT ACCCACCGGG CCCACAGCCG CACCCCGGCG CGTACCCACC GCCCGCCGGC
ATGCCCCCGC CACCACCACC GATGGCCCCG GCCGGCGCCG AACGCCGGCA GCGGCTGCAC
CCGCTCTCCC CGGCGCTGCA CGGTGCCAAG TCGCTGGTCG TGGTAATCGC CGGGCTCTCC
TGGTCGACCC TGTCCCGGGT AGGCTTCGGC TGGTTCGCGG TGCTGGCGGT GGTGCTGGCG
CTCGCCGCCA CCGTGCTCGC CGTGGTCAGC TGGTACAACA CCGGCTACCA GGTGGTCGAC
CGCGAGCTAC GCGTGTACGA GGGTCTGCTC TGGCGACGGA CCCGGGCCAT CCCGTTGGAG
CGGCTCCAGG CCGTGGAGGT GGTCCGGCCG CTGCTCGCCC AACTCACCGG GCTGGCGGAG
CTCCGGCTCG AGGTGGTCGG CGGGGGCAAG ACCGAGGCAC CGCTGGCCTA TCTGAGCGTG
GCGGACGCGG CCGCCCTGCG ACAGCGGCTG CTCGCCTTGG CCGGTCCGCT GACCGGGACC
GCCCCCCCGG CAACGGGTGC GCTGCCCGTC CAGCCCGAGC AGGCCCCACC CGGCCGGCCG
CTACACGCTG TCCGCAACGG GGACCTGTTA CTGAGCCAGC TACTCACCCC ACAGGCGCTC
ATGATCCCGT TCGGGGTGGC GTTCGTGGCG ACGCAGTTCC TCTCCGGCGA CTCCTGGTCG
TTCGTCGCGG TGGCGAGCAC GCTGACCGCT ATGGCCGGCG TACTGCTACA GCCGATCCGC
CGGGTGCTCG ACGACTGGAA CTTCCGGCTG TCCCGCGACG CCGACACGCT GCGGGTACGC
AACGGCCTGC TGGAAACCCG GGCACAGACC GTACCGCTGC ACCGGGTGCA GACGGTCGGC
GCGACCTGGC CGCTGCTGTG GCGGGTGAAG GGCTGGCTGC GGCTGCGGCT GGAGGTGGCC
GGCTACTCGG CGGGCGAGGG CGACGGGAGC AACCGCCCGG ACCGGCTGCT CCCGGTCGGA
GAGCGAACGG TCGCCGAGGC GATCCTCACC GAGGTGCTAC CCGGGGTACG CCTCGACGGT
CTACCCCTGA CCCCGCCGCC GACGCGGGCC CGCTGGCTGA ACCCACTGAG CCAACGGGTG
CTCGGGGCGG GACTGCACGA ACGGGTGTTC GCGGTCCGCT CCGGCCTACT CACCCGCCAG
ATCGTCGTCG TGCCATATGC CCGTATCCAG AGCGTTCGGG TCGTGCAGGG ACCGGTGCAG
CGGCGGCTGG GACTGGCGAC GGTACATGCC GACACGGCCG GCGGTGCCGG CGCCGCCGCG
CAGGACCGGG CGGTGGCCGA GGCGTGGGTC CTGGCCGCCG AACTGACGGC CCGCGCGCAC
CACGCTCGGC GAGCCGGCCG CTTGCGGTAG
 
Protein sequence
MSEPAAWGPE EVRPTGPQPH PGAYPPGPQP HPGAYPPPAG MPPPPPPMAP AGAERRQRLH 
PLSPALHGAK SLVVVIAGLS WSTLSRVGFG WFAVLAVVLA LAATVLAVVS WYNTGYQVVD
RELRVYEGLL WRRTRAIPLE RLQAVEVVRP LLAQLTGLAE LRLEVVGGGK TEAPLAYLSV
ADAAALRQRL LALAGPLTGT APPATGALPV QPEQAPPGRP LHAVRNGDLL LSQLLTPQAL
MIPFGVAFVA TQFLSGDSWS FVAVASTLTA MAGVLLQPIR RVLDDWNFRL SRDADTLRVR
NGLLETRAQT VPLHRVQTVG ATWPLLWRVK GWLRLRLEVA GYSAGEGDGS NRPDRLLPVG
ERTVAEAILT EVLPGVRLDG LPLTPPPTRA RWLNPLSQRV LGAGLHERVF AVRSGLLTRQ
IVVVPYARIQ SVRVVQGPVQ RRLGLATVHA DTAGGAGAAA QDRAVAEAWV LAAELTARAH
HARRAGRLR