Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3257 |
Symbol | |
ID | 5703739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 3749525 |
End bp | 3750994 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641272684 |
Product | membrane-flanked domain-containing protein |
Protein accession | YP_001538051 |
Protein GI | 159038798 |
COG category | [S] Function unknown |
COG ID | [COG3428] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGAGC CGGCCGCGTG GGGCCCGGAG GAGGTCCGGC CGACTGGCCC GCAGCCACAC CCCGGCGCAT ACCCACCGGG CCCACAGCCG CACCCCGGCG CGTACCCACC GCCCGCCGGC ATGCCCCCGC CACCACCACC GATGGCCCCG GCCGGCGCCG AACGCCGGCA GCGGCTGCAC CCGCTCTCCC CGGCGCTGCA CGGTGCCAAG TCGCTGGTCG TGGTAATCGC CGGGCTCTCC TGGTCGACCC TGTCCCGGGT AGGCTTCGGC TGGTTCGCGG TGCTGGCGGT GGTGCTGGCG CTCGCCGCCA CCGTGCTCGC CGTGGTCAGC TGGTACAACA CCGGCTACCA GGTGGTCGAC CGCGAGCTAC GCGTGTACGA GGGTCTGCTC TGGCGACGGA CCCGGGCCAT CCCGTTGGAG CGGCTCCAGG CCGTGGAGGT GGTCCGGCCG CTGCTCGCCC AACTCACCGG GCTGGCGGAG CTCCGGCTCG AGGTGGTCGG CGGGGGCAAG ACCGAGGCAC CGCTGGCCTA TCTGAGCGTG GCGGACGCGG CCGCCCTGCG ACAGCGGCTG CTCGCCTTGG CCGGTCCGCT GACCGGGACC GCCCCCCCGG CAACGGGTGC GCTGCCCGTC CAGCCCGAGC AGGCCCCACC CGGCCGGCCG CTACACGCTG TCCGCAACGG GGACCTGTTA CTGAGCCAGC TACTCACCCC ACAGGCGCTC ATGATCCCGT TCGGGGTGGC GTTCGTGGCG ACGCAGTTCC TCTCCGGCGA CTCCTGGTCG TTCGTCGCGG TGGCGAGCAC GCTGACCGCT ATGGCCGGCG TACTGCTACA GCCGATCCGC CGGGTGCTCG ACGACTGGAA CTTCCGGCTG TCCCGCGACG CCGACACGCT GCGGGTACGC AACGGCCTGC TGGAAACCCG GGCACAGACC GTACCGCTGC ACCGGGTGCA GACGGTCGGC GCGACCTGGC CGCTGCTGTG GCGGGTGAAG GGCTGGCTGC GGCTGCGGCT GGAGGTGGCC GGCTACTCGG CGGGCGAGGG CGACGGGAGC AACCGCCCGG ACCGGCTGCT CCCGGTCGGA GAGCGAACGG TCGCCGAGGC GATCCTCACC GAGGTGCTAC CCGGGGTACG CCTCGACGGT CTACCCCTGA CCCCGCCGCC GACGCGGGCC CGCTGGCTGA ACCCACTGAG CCAACGGGTG CTCGGGGCGG GACTGCACGA ACGGGTGTTC GCGGTCCGCT CCGGCCTACT CACCCGCCAG ATCGTCGTCG TGCCATATGC CCGTATCCAG AGCGTTCGGG TCGTGCAGGG ACCGGTGCAG CGGCGGCTGG GACTGGCGAC GGTACATGCC GACACGGCCG GCGGTGCCGG CGCCGCCGCG CAGGACCGGG CGGTGGCCGA GGCGTGGGTC CTGGCCGCCG AACTGACGGC CCGCGCGCAC CACGCTCGGC GAGCCGGCCG CTTGCGGTAG
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Protein sequence | MSEPAAWGPE EVRPTGPQPH PGAYPPGPQP HPGAYPPPAG MPPPPPPMAP AGAERRQRLH PLSPALHGAK SLVVVIAGLS WSTLSRVGFG WFAVLAVVLA LAATVLAVVS WYNTGYQVVD RELRVYEGLL WRRTRAIPLE RLQAVEVVRP LLAQLTGLAE LRLEVVGGGK TEAPLAYLSV ADAAALRQRL LALAGPLTGT APPATGALPV QPEQAPPGRP LHAVRNGDLL LSQLLTPQAL MIPFGVAFVA TQFLSGDSWS FVAVASTLTA MAGVLLQPIR RVLDDWNFRL SRDADTLRVR NGLLETRAQT VPLHRVQTVG ATWPLLWRVK GWLRLRLEVA GYSAGEGDGS NRPDRLLPVG ERTVAEAILT EVLPGVRLDG LPLTPPPTRA RWLNPLSQRV LGAGLHERVF AVRSGLLTRQ IVVVPYARIQ SVRVVQGPVQ RRLGLATVHA DTAGGAGAAA QDRAVAEAWV LAAELTARAH HARRAGRLR
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