| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3251 |
|---|
| Symbol | |
|---|
| ID | 5703733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 3744116 |
|---|
| End bp | 3744847 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641272679 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001538046 |
|---|
| Protein GI | 159038793 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.433437 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCCGTA CCGTGCTGGT GACCGGGGGT AATCGCGGTA TCGGTCTGGC TGTCGCCCAA
GCCTTCGTCA GGCAGGGCGA CCGGGTGGCG GTGACCTATC GGAGTGGGGC GGCACCCGAC
GCGGCCGGTT CGGAGGCCGG TGCCGGCCGT CTGTTCGGCG TCCGCTGCGA CGTGACCGAC
TCCGACTCGG TGGATGCGGC GTTCGGCGCC ATCGAGGCGG AACTCGGCCC GGTCGAGGTG
CTGGTGGCCA ACGCCGGTAT CACCGACGAC ACACTGCTGC TACGAATGTC CGAGGACCAG
TTCACCCGGG TGCTGGACAC CAACCTGACC GGGGCGTTCC GTTGCGCCAA GCGGGCGTCG
ACGAAGATGC TCCGGGCGAA GTGGGGCCGG ATGATCTTCA TCTCGTCGGT GGTCGGGCTC
TACGGCAGCC CGGGACAGGT CAACTACGCT GCCAGTAAGG CCGGCCTGGT CGGCGTCGCC
CGGTCGATCA CCCGGGAGTT GGGCAGCCGC AACATCACCG CGAACGTGGT AGCACCCGGC
TACGTCGAGA CCGACATGAC CGCGGCGCTG CCCGAGGACC GCAAGACCGA ATACCGCAAG
GCCATCCCGG CCGGCCGGTT CGCCGCCGCG GACGAGGTGG CCGCTGCTGT CACCTGGCTG
GCGGGGGACT CCGCCGGCTA CATCAGTGGT GCGGTCATCC CGGTCGACGG CGGACTGGGC
ATGGGGCACT GA
|
|---|
| Protein sequence | MARTVLVTGG NRGIGLAVAQ AFVRQGDRVA VTYRSGAAPD AAGSEAGAGR LFGVRCDVTD
SDSVDAAFGA IEAELGPVEV LVANAGITDD TLLLRMSEDQ FTRVLDTNLT GAFRCAKRAS
TKMLRAKWGR MIFISSVVGL YGSPGQVNYA ASKAGLVGVA RSITRELGSR NITANVVAPG
YVETDMTAAL PEDRKTEYRK AIPAGRFAAA DEVAAAVTWL AGDSAGYISG AVIPVDGGLG
MGH
|
|---|
| |