| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3238 |
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| Symbol | |
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| ID | 5705389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 3729081 |
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| End bp | 3730925 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641272666 |
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| Product | thiamine pyrophosphate protein central region |
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| Protein accession | YP_001538033 |
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| Protein GI | 159038780 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.864303 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACAGCG ACGACGGATG GGTACCGACC GCGCCGTGGT CGCTGCCCCG CAACGCGACG
GTCGCCGACC ACATCACGCA GCGGATGGCC TGCTGGGGTG TCCGCCGCTA CTTCGGCTTT
CCCGGCGACG CCATCAACGG CATGACCTCT GCCGTGCAGC GCACCAACGA GCTGGCGCAG
TTCATCCAGG TCCGGCACGA GGAAACCGCC GGTTTCGCCG CGTCGGCGCA CGTCAAGTAC
GGCGGCGGCC CACTCGGCTG CGTCCTGGTG ACCAGCGGCC CCGGGGCCAT CCACGTGCTC
AACGGCCTGT ACGACGCGAA ACTCGACCAC CAGCCGGTCG TCGCACTGGT CGGACACACC
GCGCTCACCG CCGAAGGCGG CGGCTACTAC CAGGAGGTCG ACCTGCTCGC CCTCTACAAG
GACGTCGCCG CCGCGTTCCT GGCCAAACTC GACCACCCCG CCCAGGTACG TCACCTGGTC
GACCGGGCCT GCCGGACAGC TCTCGCCCGG CGTACCGTCA CCGCCCTGAT CCTCCCCCTC
GACGTGCAGG ACAAGCCGGC GGTGCCCGAC CCACCGCACG CCCACGGCTA TTACCAGACC
AGCAGCGTGC CGGGAAGTGG CCCGACCATC CCGCCGGAGA CCGACGTTCG CCGCGCCGCC
GAGGTGCTAC GCGGCGGCGA GCGGGTGGCG ATGCTGGTCG GTCAGGGTGC GCTCGGCGCC
GAGACCGAGG TACGCGAGGT CGCCCGGCGG CTCGGCGCGG GTGTGGCGAC CGCGCTGCTG
GGCTTCACCG TGGTCGACCA CCGCGAGCCC TGGGTGACCG GTGCGATCGG CCTGCTCGGC
ACCCGGCCCA GCTGGCAGCT CATGCAGGAG TGCGACCGGC TGTTGATCGT CGGGAGCAAC
CTGCCGTACT CCGAGTTCTA CCCACCACCG GGACGGGCGC GGGCGGTGCA GATCGACCGG
GACGGCACCC TGCTGGGACT GCGGTACCCG ACCGAGGTGA ACCTGACCGG CGACGCCGCG
CCGACCCTTC GGGCCCTGCT GCACGAGTTG GGCCCCGGCC CCGGCCCGAC CCGCTGGCGG
GAGACGCTCA GCCGGAAGGT GGCATCGTGG CGGCAGTCGC AGCGTGAGCT GGCGGAGCAG
CCCGCCGACC CGATCAACCC TCAGATGATC TTCACTCACC TCAACGAACG GCTCCCCGAC
GACGTGCTGC TCGCCGTCGA CTGCGGTACC ACCACCGCCT GGTACGCCCG GCACGTTCAG
GTCCGCCCGG GAATGCTGGC CAGCATGTCG GGCACCCTGC TGTCCATGGG CGGCGCCATG
CCGTACGGCA TCGCCGCCAA GTTCGCCCAT CCCGACCGGC CACTGGTGGC CCTCATCGGC
GACGGGGCGA TGCAGATGAA CGGTGTCAAC GAGCTGATCA CAGTGGCGAA GTACTGGCGT
GGCTGGACCG ACCCGCGCTT CGTGGTGCTG GTCCTCAATA ACCGGGACCT GGCGTTCGTG
AGCTGGGAGC AGCGGTCCAG CGAAGGCACG CCGATGTTCC CCGACAGCCA GCAACTGCCC
GACATCGCCT ACCACCGGTG GGCCGAGGTG CTGGGGCTAC GCGGCGAGCT GGTGGACTCC
CCCGACCAGG TGCCGGACGC GTGGGAACGG GCCTTGGGCG CCGACCGTCC CACCGTCATC
AACGCTCTGG TCGACCCGGC CGAGATGATG CTGCCGCCGC ACTTCACCCC CGAACAGGTC
CGCAACACCG CCATGGCGGT GCTACGTGGC GACACCGACT GGGCCGGCAT CGTCCGTCGC
GGACTCCCCG CCACGCTCAG CACCTACCGG CCACGCCGAG GCTGA
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| Protein sequence | MDSDDGWVPT APWSLPRNAT VADHITQRMA CWGVRRYFGF PGDAINGMTS AVQRTNELAQ
FIQVRHEETA GFAASAHVKY GGGPLGCVLV TSGPGAIHVL NGLYDAKLDH QPVVALVGHT
ALTAEGGGYY QEVDLLALYK DVAAAFLAKL DHPAQVRHLV DRACRTALAR RTVTALILPL
DVQDKPAVPD PPHAHGYYQT SSVPGSGPTI PPETDVRRAA EVLRGGERVA MLVGQGALGA
ETEVREVARR LGAGVATALL GFTVVDHREP WVTGAIGLLG TRPSWQLMQE CDRLLIVGSN
LPYSEFYPPP GRARAVQIDR DGTLLGLRYP TEVNLTGDAA PTLRALLHEL GPGPGPTRWR
ETLSRKVASW RQSQRELAEQ PADPINPQMI FTHLNERLPD DVLLAVDCGT TTAWYARHVQ
VRPGMLASMS GTLLSMGGAM PYGIAAKFAH PDRPLVALIG DGAMQMNGVN ELITVAKYWR
GWTDPRFVVL VLNNRDLAFV SWEQRSSEGT PMFPDSQQLP DIAYHRWAEV LGLRGELVDS
PDQVPDAWER ALGADRPTVI NALVDPAEMM LPPHFTPEQV RNTAMAVLRG DTDWAGIVRR
GLPATLSTYR PRRG
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