Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3223 |
Symbol | |
ID | 5705446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 3714334 |
End bp | 3714843 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641272654 |
Product | BadM/Rrf2 family transcriptional regulator |
Protein accession | YP_001538021 |
Protein GI | 159038768 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGTTGC CCATCAGCAC CGAATGGCTG TTGCACTGCG CCGCGACCCT GGCACAACTC GACGCGGGCT CCACCGCATC GGCGGCACAA CTCGCGCGGT ACTACGACCT CCCGGCGCCC TATCTCGCCA AGCAGCTACA GGCGCTCGTC AAGGCCGGCG TCCTGGTCGC GACGACAGGT CCCACCGGTG GGTTCCGGCT CGCGCAACCT GCATCCGAGA TCACCCTGCT GCGGATCGTC GAGGCGGTCG GCGGCACCTC CCCGCCGTAC GTGTGCCGCG AGATCCGCCA ACAGGGGCAG GGGGCGCTCC CCGCCGACGA GTGCCAGAAC ATGTGCGTGC TCGCCGAGAA GATGACCGAG GCACACGAGG CGTGGCGGCG TAGCCTCGCC GGCGTCTCAC TCGCCGACAT CGTCGCCTCA CTGCCGCCGA CGGCACCAGC CCGCACCCGG TCCCGCCTCA CGTCAACGAT CAGTGCCGCA CCGTCGCGCC CGTCGCCGAG CGCACCCTGA
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Protein sequence | MKLPISTEWL LHCAATLAQL DAGSTASAAQ LARYYDLPAP YLAKQLQALV KAGVLVATTG PTGGFRLAQP ASEITLLRIV EAVGGTSPPY VCREIRQQGQ GALPADECQN MCVLAEKMTE AHEAWRRSLA GVSLADIVAS LPPTAPARTR SRLTSTISAA PSRPSPSAP
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