Gene Sare_3223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3223 
Symbol 
ID5705446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3714334 
End bp3714843 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content70% 
IMG OID641272654 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_001538021 
Protein GI159038768 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGTTGC CCATCAGCAC CGAATGGCTG TTGCACTGCG CCGCGACCCT GGCACAACTC 
GACGCGGGCT CCACCGCATC GGCGGCACAA CTCGCGCGGT ACTACGACCT CCCGGCGCCC
TATCTCGCCA AGCAGCTACA GGCGCTCGTC AAGGCCGGCG TCCTGGTCGC GACGACAGGT
CCCACCGGTG GGTTCCGGCT CGCGCAACCT GCATCCGAGA TCACCCTGCT GCGGATCGTC
GAGGCGGTCG GCGGCACCTC CCCGCCGTAC GTGTGCCGCG AGATCCGCCA ACAGGGGCAG
GGGGCGCTCC CCGCCGACGA GTGCCAGAAC ATGTGCGTGC TCGCCGAGAA GATGACCGAG
GCACACGAGG CGTGGCGGCG TAGCCTCGCC GGCGTCTCAC TCGCCGACAT CGTCGCCTCA
CTGCCGCCGA CGGCACCAGC CCGCACCCGG TCCCGCCTCA CGTCAACGAT CAGTGCCGCA
CCGTCGCGCC CGTCGCCGAG CGCACCCTGA
 
Protein sequence
MKLPISTEWL LHCAATLAQL DAGSTASAAQ LARYYDLPAP YLAKQLQALV KAGVLVATTG 
PTGGFRLAQP ASEITLLRIV EAVGGTSPPY VCREIRQQGQ GALPADECQN MCVLAEKMTE
AHEAWRRSLA GVSLADIVAS LPPTAPARTR SRLTSTISAA PSRPSPSAP