| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3180 |
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| Symbol | |
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| ID | 5705793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 3665389 |
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| End bp | 3668280 |
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| Gene Length | 2892 bp |
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| Protein Length | 963 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641272611 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001537978 |
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| Protein GI | 159038725 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000076749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCCCGAC GTCGCCGCCG CGCGATGATC ATCACGGCGA TGGTGGTGGC GGCCGGCGGA
GCGACCGTGC CCGCCAGGGC CGCCCAAGCC ACGCCGGCCT GCCACGTGGT CTACACGACC
AACGACTGGG GCAGCGGCTT CACCGCGAAC ATCGCCCTCA CCAATCTCGG CGACCCGATC
CAGGACTGGA CCCTGCGGTT CGCGTTCGCC GGCAACCAGA CCATCACCCA CGGCTGGTCG
GCGACCTGGA GTCAGGACGG TAGCGACGTC ACCGCCACCA ACGAGTCGTG GAACGGTGAC
CTCGGCACCG GTGATGCCGC GCACATCGGA TTCAACGCCA CGTACAGCGG CACCAACGCC
GAGCCGACGT CCTTCTCCGT CAACGGCGTG AGCTGCGGCG GCGTACAGCA GCCGCCCACG
GTCACGCTGG ACGTGCCCGC CGGGCCGTTC GAGGCGCCCG CCGACGTGCC GCTGACGGCC
GCCGCCAGCG ATCCGGACGG GACCATCAGC AAGGTTGACT TCTACCGCAA CGGCCTGCTG
GTCGACACCG ACACCACGGC CCCGTACGCG TACACCCTGC AGGCGCTGCC GGCGGGCACC
TACACCGTGC AGGCCAAGGC GTACGACGAC ACCGGGCGCA GCGCCGTCGC GGAGAAGTCG
TTCACCGTCG AGCCCGCGTC CGGCCCACGA CTGGTCGCCA CCCCAGCCGC GGTGGGCGTA
CCCGAGGGCG CCAGCGCCAC CGTCACGCTG ACGTTGAGCG AGGCGCCGGC CGCGAGCGTC
CCGGTGAGCC TCACCCGCAC CGGTGACACT GACATCACTG TCGCGCCCAC GTCGCTGACG
CTGACCACCG GCAACTGGAA CACCGGTGTC ACCGTGACCG TGTCGGCGGC CGAGGACGCC
GACACCGCCG GGGGCACCGC GACGATCACC GCGTCCGCTG CCGGCCTCGC CGCACTGGCG
ATCACCGCGA CGGAGATGGA CAACGACAAC CCGGGCGGCG ACAACGAGTA CATCGCGCGG
TTCCTCACCC AGTACGGCAA GATCAAAAAT TCGGGGTACT TCAGCCCCGA GGGCGTGCCG
TACCACGCCA TCGAGACCCT GATCGTCGAG GCGCCCGACC ACGGCCACGA GACCACGAGC
GAGGCATTCA GCTTCTGGCT CTGGCTGGAG GCGCAGTACG GCCGGGTGAC GGAGAACTGG
GCGCCGTTCA ACACCGCCTG GACGGTGCTG GAGAACTACA TCATCCCGTC GTCGGCCGAC
CAGCTCACGG CCGGCGCTCC CGGTACCGCT CAGTACGCCG CCGAGTACGA CCTGCCCAGC
CAGTACCCGT CGCAGCTGCA ACCGAACGTT CCGGTCGGCC AGGACCCGCT GCGGGGTGAG
CTCCAGTCCA CCTATGGCAC CGGTGACATC TACGGCATGC ACTGGCTGCT CGACGTGGAC
AACACCTACG GCTTCGGTCG GTGCGGCGAC GGCACCACCC GGCCGGCGTA CATCAACACC
TTCCAGCGCG GTCAGCAGGA GTCGGTCTGG GAGACCGTCC CGCAGCCCTC CTGCGAGACC
TTCACCCACG GCGGGCAGTA CGGCTTCCTG GACATCTCCG TCAAGGAGCA GAACGCCCCG
GCGAAGCAGT GGAGGTACAC CAACGCGCCG GACGCCGACG CCCGCGCCGT GCAGGCTGCC
TACTGGGCGC TGACCTGGGC CAAGCAGCAG GGCAAGGCGG CGGATGTGGC GGCCACTGTG
GCCAGGGCCG CCAAGTTGGG CGACTACCTG CGCTACGCGA TGTTCGACAA GTACTTCAAG
AAGATCGGCA ACTGTGTCGG GGCGTCCACC TGCCCGGCCG GCAGTGGCCG AGAGTCCGCG
CACTACCTTT TGTCCTGGTA CTACGCCTGG GGCGGCGCGT ACGAGCCGGG TCAGGACTGG
TCGTGGCGGA TCGGCTCCAG CCACAACCAC TTCGGCTACC AGAACCCGTT CGCCGCCTGG
GCGTTGACCA ACGTGCCGGA ACTCGAGCCG AGGTCGCCGA GCGCGACCAC CGACTGGGCC
AGGAGCCTGG AGCGGCAGCT GGAGTTGTAC ACCTGGCTGC AGTCCGCCGA GGGCGCGATC
GCCGGCGGCG CGACCAACAG CTGGGGCGGC CGGTACGCCC AGCCACCGGC TGGCACACCG
ACCTTCTACG GCATGTTCTA CGACGAGAAG CCCGTCTACC ACGACCCGCC GTCGAACCAG
TGGTTCGGCA TGCAGGTCTG GTCGATGCAC CGCGTCGCCG AGCTGTATCT GCAGACCGGT
GACGCCCGGG CCGAGGTGTT GCTGGACAGG TGGGTGCCGT GGGCGATCGC CAACACGAGC
CTGGGCGCCG ACTGGTCGAT CCCGGCTGAA CTGACGTGGA CGGGCAAGCC GAACACGTGG
AGCCCGACCA ACCCGCAGCC GAACACCGAC CTACACGTCG AGGTCACCGA CACCGGGCAG
GACGTCGGTG CCGCGGCCGC CTACGCCCGG ACCCTGATCG CCTACGCGGC GAGGTCAGGA
GACGTGGCCG CCAAGACCAC CGCCAAGGGG CTGTTGGACG CGCTGCACGC CGCCAGCGAT
GCCCTGGGCG TGTCGACGGT GGAGAAGCGG GGCGACTACG AGCGCTTCGA CGACGTCTAC
GACGCGAGCA CCGGGCAGGG TCTCTACCTC CCGCCGGGCT GGACGGGCAC GATGCCCAAC
GGTGATGTGA TCGCGGCGGG TAGGAGTTTC GTCGACATCC GGTCGTTCTA CCTGAACGAC
CCGGATTGGC CGAAGGTGCA GGCATACCTT GATGGTGGCG CCGAGCCGAC GTTCCGTTAC
CACCGTTTCT GGGCCCAGGC CGACGTCGCG ATGGCGTACG CCGACTTCGG GCGGCTGTTC
CCGACTGGTT GA
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| Protein sequence | MARRRRRAMI ITAMVVAAGG ATVPARAAQA TPACHVVYTT NDWGSGFTAN IALTNLGDPI
QDWTLRFAFA GNQTITHGWS ATWSQDGSDV TATNESWNGD LGTGDAAHIG FNATYSGTNA
EPTSFSVNGV SCGGVQQPPT VTLDVPAGPF EAPADVPLTA AASDPDGTIS KVDFYRNGLL
VDTDTTAPYA YTLQALPAGT YTVQAKAYDD TGRSAVAEKS FTVEPASGPR LVATPAAVGV
PEGASATVTL TLSEAPAASV PVSLTRTGDT DITVAPTSLT LTTGNWNTGV TVTVSAAEDA
DTAGGTATIT ASAAGLAALA ITATEMDNDN PGGDNEYIAR FLTQYGKIKN SGYFSPEGVP
YHAIETLIVE APDHGHETTS EAFSFWLWLE AQYGRVTENW APFNTAWTVL ENYIIPSSAD
QLTAGAPGTA QYAAEYDLPS QYPSQLQPNV PVGQDPLRGE LQSTYGTGDI YGMHWLLDVD
NTYGFGRCGD GTTRPAYINT FQRGQQESVW ETVPQPSCET FTHGGQYGFL DISVKEQNAP
AKQWRYTNAP DADARAVQAA YWALTWAKQQ GKAADVAATV ARAAKLGDYL RYAMFDKYFK
KIGNCVGAST CPAGSGRESA HYLLSWYYAW GGAYEPGQDW SWRIGSSHNH FGYQNPFAAW
ALTNVPELEP RSPSATTDWA RSLERQLELY TWLQSAEGAI AGGATNSWGG RYAQPPAGTP
TFYGMFYDEK PVYHDPPSNQ WFGMQVWSMH RVAELYLQTG DARAEVLLDR WVPWAIANTS
LGADWSIPAE LTWTGKPNTW SPTNPQPNTD LHVEVTDTGQ DVGAAAAYAR TLIAYAARSG
DVAAKTTAKG LLDALHAASD ALGVSTVEKR GDYERFDDVY DASTGQGLYL PPGWTGTMPN
GDVIAAGRSF VDIRSFYLND PDWPKVQAYL DGGAEPTFRY HRFWAQADVA MAYADFGRLF
PTG
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