| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3138 |
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| Symbol | |
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| ID | 5706348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 3568463 |
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| End bp | 3572128 |
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| Gene Length | 3666 bp |
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| Protein Length | 1221 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641272570 |
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| Product | nitrate reductase, alpha subunit |
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| Protein accession | YP_001537937 |
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| Protein GI | 159038684 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG5013] Nitrate reductase alpha subunit |
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| TIGRFAM ID | [TIGR01580] respiratory nitrate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000648615 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCGGGCA CGACGGAGCA TGCAAGCAGA GCGTTGCTGG CGGTCGGGGG CCTGGTACGC
CAGGCGGAGG TCTCCCCCGA CGGCCGGGCG CTCTACCAGG TCGGTGGTCG GGAGGCGGAC
GCGTTCTATC GGGACCGTTG GTCGTACGAC AAGGTGGTGC GCTCCACGCA CGGGGTCAAC
TGCACAGGTT CGTGCTCGTG GAAGGTGTAT GTCCGCGACG GCATCATCAC CTGGGAGCAG
CAACAGACCG ACTACCCCAG TGTCGGCCCG GACCGGCCCG AGTACGAGCC GCGGGGCTGT
CCACGGGGTG CGGCGTTCTC CTGGTACACG TACTCGCCGA CGCGGGTGCG CTACCCGTAC
GCCCGCGGTG TGCTGGTGGA GATGTACCGC GAGGCCCGTC AACGGTTGGG TGATCCGCTG
GCGGCGTGGG CGGACATTCA GGCCGATCCT CAACGGCGAC GTCGGTACCA GCGGGCCCGG
GGTAAGGGCG GCCTGGTGCG GGTGTCCTGG GACGAGGCGC TGGAGATGGT CGCCGCGGCG
CACGTGCACA CGATCGCCGA GTACGGGCCG GATCGCGTCG CCGGGTTCTC GCCGATTCCG
GCCATGTCGA TGGTGTCGCA CGCGGTGGGC GCGCGCTTCC TGTCGTTGAT CGGCGGGTCG
ATGTTGTCGT TCTACGACTG GTACGCGGAC CTGCCGGTGG CGTCGCCGCA GATGTTCGGC
GACCAGACCG ATGTGCCGGA GTCCGGGGAC TGGTGGGACG CTTCCTACTT CATCATGTGG
GGCTCCAACG TCCCGGTGAC CCGCACCCCG GACGCGCACT GGATGGCCGA GGCGCGGTAC
CGGGGCCAGA AGGTCGTGGT GGTCAGCCCG GACTTCGCCG ACAACGTCAA GTTCGCCGAC
GAATGGATGC CCGCCCAGCC CGGTACCGAC GGGGCGCTGG CGATGGCGAT GGGTCACGTG
ATCCTCAAGG AGTTCTTCGT CGACTGGAAC ACACCACGGT TCGTCGACTA CGTACGCCAA
TTCACCGACC TGCCGTACCT GGTCGGACTG GAACCGGTCG ACGGTGGCGG CTATCGCCCC
GGGAAGTTCG TCACCGCCAT CGACCTGGGA GACGACGACA CGGAGGCGGC CTTCCGACCG
GTGCTGTGGG ATTCCGTCGC GGACGCGCCG GCGGTGCCGA ACGGATCGCT GGGGCACCGC
TACAGCGAAG CCGGCGTCGG TAGGTGGAAC CTGGACCTGG GCGAGATCGT GCCCCGGCTC
AGCTGCGCGG GCGGTGTGGC GGTGGAGGTG ACGCTGCCGC GGTTCGACGC CGAACGGCCC
GAAGTGATGC GTCGCGGCGT ACCCACCACC CGAGTGGGCG GACAACTGGT GACCACCGTG
TTCGACCTGA TGCTCGCCCA GTACGGCGTC GCCCGTCCCG GCCTGCCCGG CAGTTGGCCA
ACCGGGTACG ACGATCCCGC CGAACCGTAC ACGCCGGCGT GGCAGGAGCC GATCACCGGC
GTACCGGCGA CGCAGGTGGC CCGGGTGGCC CGGGAGTTCG CGGACAACGC CGAGCGGTCC
GGTGGCCGCT CAATGATCGT GATGGGTGCG GGTACGAACC ACTGGTTCCA CTCCGACACC
ACGTACCGGG CGATGCTGGC GCTGACGACG CTGACCGGCT GCCAGGGGGT CAACGGCGGC
GGATGGGCGC ACTATGTGGG CCAGGAGAAG TGCCGCCCGG TGACCGGGTG GCAGCAGCTC
GCGTTCGCGC TGGACTGGGT CCGCCCGCCC CGGCAGATGA TCGGCACCGC CTTCTGGTAC
GTGCACACCG ACCAGTGGCG CTACGACACG TACTCTGCCG ATGCCCTCGC CGCGCCGACC
GGCACCGGAG CGTTCGCCGG AAAGCACACC ATCGACCTGC TGGCCCAGTC GGCCCGACTG
GGCTGGATGC CGTCCATGCC CACCTTCGAC CGCAACCCGC TCGACCTCGC CGACGAGGCA
CTCGCCGCGA ATCCCGACGA CCCAGCGCGC TACGTGGCCG ACGCACTGGT CGATGGACGA
CTCGGCTTCG CCTGCGCCGA CCCGGACGCC CCGGAGAACT GGCCGCGGGT GTTGACCGTG
TGGCGCGCGA ACCTGCTCGG ATCGTCGGGC AAGGGCAACG AGTACTTTCT GCGTCACCTG
CTCGGCACCG AGTCGAACCT GCGGGCGGAA CAGGCCCGGG CCGACGAGCG CCCGACCGAC
GTCGTGTGGC GGGACGAGGC CCCGGAGGGC AAGCTCGACC TGCTGTTGAG CCTCGACTTC
CGGATGACGT CCACCACGCT GTTCTCCGAT GTGGTCTTGC CGGCGGCCAC CTGGTACGAG
AAACACGACC TCAGCACCAC CGACATGCAT CCGTTCGTGA ACGCGTTCAC CCCGGCGATC
AACCCGCCGT GGCAGACCCG CACCGACTTC ACCGCCTTTC ATGGGATCGC CAAGGCCTTC
TCGTCCCTGG CCAGCCAGCA TCTCGGGGTA CGGAAGGACC TGGTGGCCAC GCCGCTGCTG
CACGACACCC CGGACGCGAT GGCCACTCCG GGCGGGGTCG TGCGTGACTG GCGGACGGGC
GACGGTCCCC CCGTACCTGG TCGGACGATG CCGAAGTTCG TCGTTGTCGA GCGCGACTAC
GGCGCGGTCG CCGATCGGAT GGCCGCTCTC GGCCCCCTGC TCGACCGGCT GGGCACCACG
AACAAGGCGG TCACCGTCGA CGTGAACCAG GAGGTCGACT ACCTGCGGCG GGTCAATGGC
GTGGTGCGGG GTGGTTCGGC ACAGGGCCGG CCCCGGCTGG ACACCGACAT CCGGGCGTGT
GAGGCCATCC TGGCGCTGTC GGGCACCACC AACGGCCGTG TCGCCACCGA GGGGTTCCGG
TTCCTGGAAC GGCGTACCGG TCAGCGGTTG GCAGACCTTG CCGCCGAGGC GGAGGGCAAG
CAGATCACCT TTCCCGACAC CCAGTCACGT CCAGTGCCGG TGATCACGAG CCCGGAGTGG
TCGGGCAGCG AGCACGGCGG TCGCCGGTAC TCGGCGTTCA CGATCAACAC GGAGCGGCTC
AAGCCGTGGC ACACGTTGAC GGGGCGGCAG CACTTCTTTC TGGACCACGA CTGGATGCAC
GAGACGGGCG AGGCGCTGCC GGTCTTCCGG CCGCCGCTGG ACATGCACCG ACTCTTCGGC
GAGCCGCGGC TCAGCGGCAA CGGAGAGTTG GAGATCACGG TGCGGTACCT GACACCGCAT
TCGAAGTGGT CCATCCACTC GGAGTATCAG GACAACCTGA TCATGCTGAC CCTGTCCCGC
GGCGGGCCGA CGATGTGGAT GAGTGAGGCG GATGCGGCCA AGATCGGGGT GCGGGACAAC
GAGTGGATCG AGGCGGTCAA CCGCAACGGT GTGGTGGTCT GCCGGGCGGT CGTCAGCTAC
AAGATGCCCG CGGGCACGGT CTACATGTAC CACGCGCAGG AGCGGGTGAT CGACGTGCCG
AAAGCAGAGG TCAACGGCCG TCGTGGGGGA ATACACAACT CACTGACCCG ACTGCTGGTC
AAGCCCACCC ATCTGATCGG TGGCTACGCG CAGTTCGCGT TCGCGTTCAA CTATCTCGGG
CCGACCGGTA ACCAACGTGA CGAGGTGACG GTGATCCGCC GCCGCTCGCA GGAGGTGCAG
TACTGA
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| Protein sequence | MAGTTEHASR ALLAVGGLVR QAEVSPDGRA LYQVGGREAD AFYRDRWSYD KVVRSTHGVN
CTGSCSWKVY VRDGIITWEQ QQTDYPSVGP DRPEYEPRGC PRGAAFSWYT YSPTRVRYPY
ARGVLVEMYR EARQRLGDPL AAWADIQADP QRRRRYQRAR GKGGLVRVSW DEALEMVAAA
HVHTIAEYGP DRVAGFSPIP AMSMVSHAVG ARFLSLIGGS MLSFYDWYAD LPVASPQMFG
DQTDVPESGD WWDASYFIMW GSNVPVTRTP DAHWMAEARY RGQKVVVVSP DFADNVKFAD
EWMPAQPGTD GALAMAMGHV ILKEFFVDWN TPRFVDYVRQ FTDLPYLVGL EPVDGGGYRP
GKFVTAIDLG DDDTEAAFRP VLWDSVADAP AVPNGSLGHR YSEAGVGRWN LDLGEIVPRL
SCAGGVAVEV TLPRFDAERP EVMRRGVPTT RVGGQLVTTV FDLMLAQYGV ARPGLPGSWP
TGYDDPAEPY TPAWQEPITG VPATQVARVA REFADNAERS GGRSMIVMGA GTNHWFHSDT
TYRAMLALTT LTGCQGVNGG GWAHYVGQEK CRPVTGWQQL AFALDWVRPP RQMIGTAFWY
VHTDQWRYDT YSADALAAPT GTGAFAGKHT IDLLAQSARL GWMPSMPTFD RNPLDLADEA
LAANPDDPAR YVADALVDGR LGFACADPDA PENWPRVLTV WRANLLGSSG KGNEYFLRHL
LGTESNLRAE QARADERPTD VVWRDEAPEG KLDLLLSLDF RMTSTTLFSD VVLPAATWYE
KHDLSTTDMH PFVNAFTPAI NPPWQTRTDF TAFHGIAKAF SSLASQHLGV RKDLVATPLL
HDTPDAMATP GGVVRDWRTG DGPPVPGRTM PKFVVVERDY GAVADRMAAL GPLLDRLGTT
NKAVTVDVNQ EVDYLRRVNG VVRGGSAQGR PRLDTDIRAC EAILALSGTT NGRVATEGFR
FLERRTGQRL ADLAAEAEGK QITFPDTQSR PVPVITSPEW SGSEHGGRRY SAFTINTERL
KPWHTLTGRQ HFFLDHDWMH ETGEALPVFR PPLDMHRLFG EPRLSGNGEL EITVRYLTPH
SKWSIHSEYQ DNLIMLTLSR GGPTMWMSEA DAAKIGVRDN EWIEAVNRNG VVVCRAVVSY
KMPAGTVYMY HAQERVIDVP KAEVNGRRGG IHNSLTRLLV KPTHLIGGYA QFAFAFNYLG
PTGNQRDEVT VIRRRSQEVQ Y
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