Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3131 |
Symbol | |
ID | 5706341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3559765 |
End bp | 3560622 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641272563 |
Product | hypothetical protein |
Protein accession | YP_001537930 |
Protein GI | 159038677 |
COG category | [S] Function unknown |
COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.753755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00020327 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGGCAAGG TTGACGAGTC GGTCAACCAG ACTGACGAGG TCGACGCCGC CACGGGAAGC CAGGCACTGA CCATTCTGAT CCACACCTCC AAGGCGATGC GACCGGCACC GCGGGGCGGC GCGACCCTCA GCGTGCCCGT TCTCCGGGGC CGGGCCGAGG AACTGGCGAC GTACCTCAAG ACCCTGTCGG TGCGGCAGCT CGCCGCCGTC ATGGAGATCT CTCCGGAACT GGCCGACCGG ACGCATGGGC TGTTCGCCGA CTGGGGCACC GACCCGGCGC AGCAGTCTCC GGCTATTGAC AGCTTCGCCG GTGACATCTA CAGCGGGCTT CGCGCGTGCG ACCTCACCGC CGCTGACCGG GCGTACGCCG AAGGCCGGTT GCGTATCCTC TCCGGGCTGT ACGGCATCCT GCGCCCACAC GATGGGATTC AGCCGTACCG GCTGGAGATG GGCTATCGGT TGCCCGACCC GCCGTACGCC AACCTCTACC AGTTCTGGGG TGATTCGGTC GCTCGTCGCC TGCCGTCGGC CGGCGTCATC GTCGACCTGG CCGCCATCGA ATACAACCGG CTCGTCACCC GGTTTCTGCC CCGTGACCGG TTCGTCAGCC CCCGCTTCCT GACGATGCAT CCCAAGACGG GCGAGCCGCG GTTCGTCGTC GTGCACGCGA AGATCGCCCG AGGTGCCTTC GCGCGGTGGC TGCTGTCCGC CCGGGTCGAG AACCCGGCGG ACATCGTCGA GTTCGCTGAG ATCGGCTATC GCTACGAACC GGCCCTGAGT AAGCCCCGCC AGCCGGCCTT CGTCTGCAAG GAGTTCGAGG GCAAGGGCCT CAGCGTCCGG TTGCACGACC TGGGGTGA
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Protein sequence | MGKVDESVNQ TDEVDAATGS QALTILIHTS KAMRPAPRGG ATLSVPVLRG RAEELATYLK TLSVRQLAAV MEISPELADR THGLFADWGT DPAQQSPAID SFAGDIYSGL RACDLTAADR AYAEGRLRIL SGLYGILRPH DGIQPYRLEM GYRLPDPPYA NLYQFWGDSV ARRLPSAGVI VDLAAIEYNR LVTRFLPRDR FVSPRFLTMH PKTGEPRFVV VHAKIARGAF ARWLLSARVE NPADIVEFAE IGYRYEPALS KPRQPAFVCK EFEGKGLSVR LHDLG
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