Gene Sare_3130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3130 
Symbol 
ID5706340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3558932 
End bp3559663 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content65% 
IMG OID641272562 
ProductAsp/Glu racemase 
Protein accessionYP_001537929 
Protein GI159038676 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4126] Hydantoin racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000715439 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGCTTC TGGTCATAAA CCCGAACACC ACCCAGTCGA TGACTGACAA GATCGAAGCA 
GCCGCACGTG CCGTGGCCGC ACCAGAAACC GAGATCACCG CGGTGAATCC CACCAAGGGG
CCCACCAGCA TCGAGGGCCA CTACGACGGG GCGTTCAGCG TGCCTGGGCT CATCGACGAG
GTACGCAACG GCATGAAAGC CGGCGCGCAC GGATTCGTCA TCGCCTGTTT CGACGACACG
GGCCTGGACG CTGCCCGCAG CATCGCGACC GCACCAGTGA TCGGCATCGC CGAGGCCGCC
ATGCACGTCG CCGTCTTGAT CGGGGGCAGC TTCAGCGTGG TCGGCACACC GGCCGGCTCC
GTCCCTGTGA TCGAGAGTCT GGTGTTGCGC TACGGCTACG AACGTCACTG TCGCGGGGTC
CACGCCGCCG GATTCCCGGT ACTGGCGCTC GACGACCCCA GGTCAGGAGC CAGCAAGATG
CTGCGAGCGG ACGTCCAGCG CGTCGTCGCC GACGACCAAC CCGACTCGAT CATCCTCGGT
TGCGCCGGCG AGGCCGACCT GGCGAAGACG TACTCGCAGG AGTTCGGGCT TCCGGTGATC
GACGGAGTGG CGGCTGCGGT AAAGCTGGCT GAGGCGCTCT ACGGCCTCGA CCTCAGCACA
AGCAAGAAAC ACGGCTACGC AGCCCCACCG GACAAGTCCT ACACAGGCGG ATTCTCCCTC
TATGCTCCGT GA
 
Protein sequence
MMLLVINPNT TQSMTDKIEA AARAVAAPET EITAVNPTKG PTSIEGHYDG AFSVPGLIDE 
VRNGMKAGAH GFVIACFDDT GLDAARSIAT APVIGIAEAA MHVAVLIGGS FSVVGTPAGS
VPVIESLVLR YGYERHCRGV HAAGFPVLAL DDPRSGASKM LRADVQRVVA DDQPDSIILG
CAGEADLAKT YSQEFGLPVI DGVAAAVKLA EALYGLDLST SKKHGYAAPP DKSYTGGFSL
YAP