Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3130 |
Symbol | |
ID | 5706340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 3558932 |
End bp | 3559663 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641272562 |
Product | Asp/Glu racemase |
Protein accession | YP_001537929 |
Protein GI | 159038676 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4126] Hydantoin racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000715439 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATGCTTC TGGTCATAAA CCCGAACACC ACCCAGTCGA TGACTGACAA GATCGAAGCA GCCGCACGTG CCGTGGCCGC ACCAGAAACC GAGATCACCG CGGTGAATCC CACCAAGGGG CCCACCAGCA TCGAGGGCCA CTACGACGGG GCGTTCAGCG TGCCTGGGCT CATCGACGAG GTACGCAACG GCATGAAAGC CGGCGCGCAC GGATTCGTCA TCGCCTGTTT CGACGACACG GGCCTGGACG CTGCCCGCAG CATCGCGACC GCACCAGTGA TCGGCATCGC CGAGGCCGCC ATGCACGTCG CCGTCTTGAT CGGGGGCAGC TTCAGCGTGG TCGGCACACC GGCCGGCTCC GTCCCTGTGA TCGAGAGTCT GGTGTTGCGC TACGGCTACG AACGTCACTG TCGCGGGGTC CACGCCGCCG GATTCCCGGT ACTGGCGCTC GACGACCCCA GGTCAGGAGC CAGCAAGATG CTGCGAGCGG ACGTCCAGCG CGTCGTCGCC GACGACCAAC CCGACTCGAT CATCCTCGGT TGCGCCGGCG AGGCCGACCT GGCGAAGACG TACTCGCAGG AGTTCGGGCT TCCGGTGATC GACGGAGTGG CGGCTGCGGT AAAGCTGGCT GAGGCGCTCT ACGGCCTCGA CCTCAGCACA AGCAAGAAAC ACGGCTACGC AGCCCCACCG GACAAGTCCT ACACAGGCGG ATTCTCCCTC TATGCTCCGT GA
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Protein sequence | MMLLVINPNT TQSMTDKIEA AARAVAAPET EITAVNPTKG PTSIEGHYDG AFSVPGLIDE VRNGMKAGAH GFVIACFDDT GLDAARSIAT APVIGIAEAA MHVAVLIGGS FSVVGTPAGS VPVIESLVLR YGYERHCRGV HAAGFPVLAL DDPRSGASKM LRADVQRVVA DDQPDSIILG CAGEADLAKT YSQEFGLPVI DGVAAAVKLA EALYGLDLST SKKHGYAAPP DKSYTGGFSL YAP
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