Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3121 |
Symbol | |
ID | 5706365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3550256 |
End bp | 3550780 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641272553 |
Product | major facilitator transporter |
Protein accession | YP_001537920 |
Protein GI | 159038667 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.083055 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000923816 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCTCGCCG TGTTCCTGGG TGGGCTGAAC ATCTCCCTTC TGGTGATCGC CCTGCCGACG ATCCGGAGTG TTTTCGACTT GAGCCCGAGT GGCCAACAAT GGCTGATCTC CGGCTGTTTC CTTACGTTCG GGTTGGTGCT GGTTCCCGCC GGCCGTTACG GGGACCTGCG TGGACGGCGA AGCGTCTTCG TGGCCGGCAT CGCGTTGTTC GTGGTGGCAA GTACGGCCGC GGGTTTCGCC CCGTCGGGAA CGTGGTTGAT TGTCGCTCGG CTGGCCCAGG GGGTCGGCGT CGGGATGGCA CTTCCGCAGG TGTTCGGGAC GGTCCAGCGC ATGTTTGCGG CCCGGGAGCG GGGGCGCCCG CTCGGGCTGC TGGCCGCGGC GGTCAGCGCC TCCCGGCTGG CCGGTCCGGT ACTCGGCGGG GTACTGGTCA CCGTCGGCGG TGCCGAGCAG GGCTGGCGGT GGATCTTCCT GGCCAATGTG CCGATCGGGA TCATCGTCCC CTCGTACACG GGAAGACTCG GGTGA
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Protein sequence | MLAVFLGGLN ISLLVIALPT IRSVFDLSPS GQQWLISGCF LTFGLVLVPA GRYGDLRGRR SVFVAGIALF VVASTAAGFA PSGTWLIVAR LAQGVGVGMA LPQVFGTVQR MFAARERGRP LGLLAAAVSA SRLAGPVLGG VLVTVGGAEQ GWRWIFLANV PIGIIVPSYT GRLG
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