Gene Sare_3121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3121 
Symbol 
ID5706365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3550256 
End bp3550780 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content68% 
IMG OID641272553 
Productmajor facilitator transporter 
Protein accessionYP_001537920 
Protein GI159038667 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.083055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000923816 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCTCGCCG TGTTCCTGGG TGGGCTGAAC ATCTCCCTTC TGGTGATCGC CCTGCCGACG 
ATCCGGAGTG TTTTCGACTT GAGCCCGAGT GGCCAACAAT GGCTGATCTC CGGCTGTTTC
CTTACGTTCG GGTTGGTGCT GGTTCCCGCC GGCCGTTACG GGGACCTGCG TGGACGGCGA
AGCGTCTTCG TGGCCGGCAT CGCGTTGTTC GTGGTGGCAA GTACGGCCGC GGGTTTCGCC
CCGTCGGGAA CGTGGTTGAT TGTCGCTCGG CTGGCCCAGG GGGTCGGCGT CGGGATGGCA
CTTCCGCAGG TGTTCGGGAC GGTCCAGCGC ATGTTTGCGG CCCGGGAGCG GGGGCGCCCG
CTCGGGCTGC TGGCCGCGGC GGTCAGCGCC TCCCGGCTGG CCGGTCCGGT ACTCGGCGGG
GTACTGGTCA CCGTCGGCGG TGCCGAGCAG GGCTGGCGGT GGATCTTCCT GGCCAATGTG
CCGATCGGGA TCATCGTCCC CTCGTACACG GGAAGACTCG GGTGA
 
Protein sequence
MLAVFLGGLN ISLLVIALPT IRSVFDLSPS GQQWLISGCF LTFGLVLVPA GRYGDLRGRR 
SVFVAGIALF VVASTAAGFA PSGTWLIVAR LAQGVGVGMA LPQVFGTVQR MFAARERGRP
LGLLAAAVSA SRLAGPVLGG VLVTVGGAEQ GWRWIFLANV PIGIIVPSYT GRLG