Gene Sare_3117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3117 
Symbol 
ID5706557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3545252 
End bp3546130 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content75% 
IMG OID641272549 
Producthypothetical protein 
Protein accessionYP_001537916 
Protein GI159038663 
COG category[S] Function unknown 
COG ID[COG3342] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.369437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00347473 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACCTTCT CGCTCGTTGC CCGCTCCGCC GACGGCCGGC TGCACGGTGT GGTCGTGGCC 
AGCAGGTTCC TCGCCGCTGG GGCGCTGGTA CCGGCGGCCG AGGCCGAGGT CGGCGCGATC
GCCACCCAGG CGCACGTGAA CCTGGCCTAC CGGCCGCAGG GTCTGGCACT GCTGCGGACC
GGGGTCGGTG CGGCCGGCGT GGTCGCGGGG CTGGTCGCCG CCGATGACGA ACGCGACCAC
CGTCAGCTGG GCGTGGTGGG CGCCACCGGC CCGGGCGCGT GCTGGACCGG GCCAGCCTGC
CGTGCCTGGG CGGGCGGGCA GGCCGGGGAC GGTTGGACGG CGCAGGGCAA CATCCTGGCC
GGTCCGCACG TGATCGACGA GGTCCGCGAT GGTTGGCTCG GCGGGTCGAC GCTGCCGTTT
CCGGAGCGGC TCTTGGCCGC GTTACGCGCC GGGGACGAGG CCGGTGGGGA CCGGCGAGGG
CGGCAGAGCG CCGGCCTGCT GGTCGTCAAG CGTGGCGGCG GGTACGCCGG CACCGGTGAC
ACCCTGGTCG ACCTACGGGT TGACGACCAT CCGGACCCGG TCGCTGAGCT GGGCCGGCTA
CTCACCGCGC ACACCCGGCT GTTCAGCCGC CCGGACCCGG CCACCCTGCT CGACCTCACT
GGGGGCCTCG CGGCCGAGGT CGCCGGTCTA CTCACCGCAC TCGGACACCC GGCGGATCCG
GTCGCACCGC AGGAGGCGCT GTTCGCCTGG GCGGGTCTGG AGAATCTGGA GGAGCGGCTG
GTGCCAGGCC GGATCGACCC GATCGTGCTG GACCAGCTGC GCCAGGCCAT CCCACACGTT
CCCGCGCCCC GTGCCGCCGG TTTCCTTCCC GCCGACTGA
 
Protein sequence
MTFSLVARSA DGRLHGVVVA SRFLAAGALV PAAEAEVGAI ATQAHVNLAY RPQGLALLRT 
GVGAAGVVAG LVAADDERDH RQLGVVGATG PGACWTGPAC RAWAGGQAGD GWTAQGNILA
GPHVIDEVRD GWLGGSTLPF PERLLAALRA GDEAGGDRRG RQSAGLLVVK RGGGYAGTGD
TLVDLRVDDH PDPVAELGRL LTAHTRLFSR PDPATLLDLT GGLAAEVAGL LTALGHPADP
VAPQEALFAW AGLENLEERL VPGRIDPIVL DQLRQAIPHV PAPRAAGFLP AD