Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3117 |
Symbol | |
ID | 5706557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 3545252 |
End bp | 3546130 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641272549 |
Product | hypothetical protein |
Protein accession | YP_001537916 |
Protein GI | 159038663 |
COG category | [S] Function unknown |
COG ID | [COG3342] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.369437 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00347473 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACCTTCT CGCTCGTTGC CCGCTCCGCC GACGGCCGGC TGCACGGTGT GGTCGTGGCC AGCAGGTTCC TCGCCGCTGG GGCGCTGGTA CCGGCGGCCG AGGCCGAGGT CGGCGCGATC GCCACCCAGG CGCACGTGAA CCTGGCCTAC CGGCCGCAGG GTCTGGCACT GCTGCGGACC GGGGTCGGTG CGGCCGGCGT GGTCGCGGGG CTGGTCGCCG CCGATGACGA ACGCGACCAC CGTCAGCTGG GCGTGGTGGG CGCCACCGGC CCGGGCGCGT GCTGGACCGG GCCAGCCTGC CGTGCCTGGG CGGGCGGGCA GGCCGGGGAC GGTTGGACGG CGCAGGGCAA CATCCTGGCC GGTCCGCACG TGATCGACGA GGTCCGCGAT GGTTGGCTCG GCGGGTCGAC GCTGCCGTTT CCGGAGCGGC TCTTGGCCGC GTTACGCGCC GGGGACGAGG CCGGTGGGGA CCGGCGAGGG CGGCAGAGCG CCGGCCTGCT GGTCGTCAAG CGTGGCGGCG GGTACGCCGG CACCGGTGAC ACCCTGGTCG ACCTACGGGT TGACGACCAT CCGGACCCGG TCGCTGAGCT GGGCCGGCTA CTCACCGCGC ACACCCGGCT GTTCAGCCGC CCGGACCCGG CCACCCTGCT CGACCTCACT GGGGGCCTCG CGGCCGAGGT CGCCGGTCTA CTCACCGCAC TCGGACACCC GGCGGATCCG GTCGCACCGC AGGAGGCGCT GTTCGCCTGG GCGGGTCTGG AGAATCTGGA GGAGCGGCTG GTGCCAGGCC GGATCGACCC GATCGTGCTG GACCAGCTGC GCCAGGCCAT CCCACACGTT CCCGCGCCCC GTGCCGCCGG TTTCCTTCCC GCCGACTGA
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Protein sequence | MTFSLVARSA DGRLHGVVVA SRFLAAGALV PAAEAEVGAI ATQAHVNLAY RPQGLALLRT GVGAAGVVAG LVAADDERDH RQLGVVGATG PGACWTGPAC RAWAGGQAGD GWTAQGNILA GPHVIDEVRD GWLGGSTLPF PERLLAALRA GDEAGGDRRG RQSAGLLVVK RGGGYAGTGD TLVDLRVDDH PDPVAELGRL LTAHTRLFSR PDPATLLDLT GGLAAEVAGL LTALGHPADP VAPQEALFAW AGLENLEERL VPGRIDPIVL DQLRQAIPHV PAPRAAGFLP AD
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