Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3105 |
Symbol | |
ID | 5706579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3528891 |
End bp | 3529673 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641272538 |
Product | transposase IS4 family protein |
Protein accession | YP_001537906 |
Protein GI | 159038653 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.297989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0228656 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTCCT ACCCCGCCAC GATTCCGTTG TCCAGCCGCA CCCTGAACCA CCTCGCCGAA CGCATCCGAG GCCACCGCAA GCAGCGCCGA TCCCGATGGC GGCGTCTCGA TCCCGGCCGG CAGGCGCTGC TGGTCCTGGC CCATCTGCGT AACGGCGACA CCTACACCCG ACTCGCGGCC GGCTTCGAGA TCGGCGTCGC CACCGCCTGG CGGTACGTGC AGGAAGCGAT AGCCCTGCTC AGTTCGGCAG CCGACGACCT GGACACCGCC ATGGAACGCA TCCGCCGACT GGCGTACGCG ATCCTGGACG GCACCCTGAT GCCGACTGAC CGGATCGCCG ACCAGAAGCC GTACTACTCC GGGAAACACA AGCACCACGG CGTGAACGTG CAGGTCATCG CCGACGCCGC TGGCCGGCTC GTCTGGGCTT CACCGGCGCT GCCCGGTTCG GTCCACGACC TGACCGCAGC CCGAACCCAC GGCATCATCG ACGCGCTGAG CAGGGCAGAC GTGATGACGT TCGCCGACAT GGGCTACCAA GGAGCCCGCG GCAGCGTGCG CACCCCATTC AAGCGGCACC GCTTCCGCCC AAAGCTGTCA CGCCGGCAGA AAGCCGTGAA CCGCGCCCAC GCGACAATCC GCGCCCGCGG CGAACGCGCG ATCGCCACCC TCAAGACCTG GAAGATCCTG AACAAGCTGC GCTGCTGCCC ACGCCGAGCG ACCCCGATCG TGCAGGCCAT CCTCGTCCTG CACCACGTCG AAGCCAACCG CTACGCAGGA TGA
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Protein sequence | MLSYPATIPL SSRTLNHLAE RIRGHRKQRR SRWRRLDPGR QALLVLAHLR NGDTYTRLAA GFEIGVATAW RYVQEAIALL SSAADDLDTA MERIRRLAYA ILDGTLMPTD RIADQKPYYS GKHKHHGVNV QVIADAAGRL VWASPALPGS VHDLTAARTH GIIDALSRAD VMTFADMGYQ GARGSVRTPF KRHRFRPKLS RRQKAVNRAH ATIRARGERA IATLKTWKIL NKLRCCPRRA TPIVQAILVL HHVEANRYAG
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