| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3088 |
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| Symbol | |
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| ID | 5706823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 3506212 |
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| End bp | 3509082 |
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| Gene Length | 2871 bp |
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| Protein Length | 956 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641272524 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_001537892 |
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| Protein GI | 159038639 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.01898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGATG TCCGTTCTGA GTCGGCACTC GACGTGGCGC CAGGGTCGGT GGTAGTCATC
CGCGACGAGG AATGGCTGGT GCAGACCGCG GAAGAAACCG CGGACGGGCT CCTCGTGCAC
GTCCGCGGAC TGGGCGAACT CGTTCGTGAC GTGACCGCCA GCTTCTGCGC CTCCCTCGAC
CACATCGCAC CGCTCGATCC AGCAGCCGCG CGCGTCGTGG CGGACGACAG CCCGCGCTAC
CGCAAGGCCC GCCTCTGGCT GGAATCCACC TACCGAAAGA CCGCCGTTCC GCTCGCCGAT
CGCTCGCTCA CCGTTGCCAC ACAGGCCCTC GCGACACCGC TGAGATACCA ACAGACCGCC
GTGCGCAAGG CGCTCGACCC GGACAACCTG CGTCCCCGGA TCCTCCTGGC CGACGCGGTC
GGGCTCGGCA AGACCCTGGA AATCGGCATG ATCCTGTCGG AGCTGGTACG CCGGGGCCGA
GGCGAGCGGA TCCTCATCGT GACCCCGCGC CACGTACTCG AACAGACGCA GCAGGAATTG
TGGTCGCGCT TCGCGCTGCC GTTCGTCCGC CTCGACTCGG CCGGCATCCA ACGGGTCCGC
CAGAAGCTCC CGGCGAACCG TAACCCGTTC ACGTATTTCC GGCGGGCGAT CATCTCGATC
GACACCCTCA AGTCGGAGCG GTACGCGGCC AGCCTGAAGA AGCAGCGTTG GGACGCGGTG
GTCATCGACG AGTCGCACAA CCTCGCCAAC GCGGCCACGC AGAACAACCG GCTGGCCCGC
ACGCTTGCCC GCAATACCGA AACGATGATC CTCGCGTCGG CGACCCCGCA CAACGGCCGC
AAGGAGTCCT TCGCCGAGTT GGTCCGGCTG CTCGACCCGT CCGCGATCCC ACCCGGCGGC
GACCTGGTGG CCGCCGAGAT CGAACGGCTG GTGATCCGCC GCCACCGGCA CAGCGACGAG
GTGGCCAGCG CCGTCGGCGC CGACTGGGCG GAACGACAGG AGCCGGAGAA CGTGCTCGTC
GCCGCGAGCC GCGCGGAGAA CGCGGTCGCG CGGGAGATTG AGGACGTCTG GTTGTGGCCG
CCGGACCAAC GCACCCCCTA CTCGGGGCAG AACGCGTCGC TGTTCCCGTG GACGCTGGCC
AAGGCATTCC TGTCGTCGCC GGCCGCGCTG GCGGAAACCA TCCGGCAGCG GCTGGCTCGC
CTCGGGCACG ACGCCGCCGC GAGCAGAGAA CACGCGGCGC TGAATCGGCT GGCCGACCTC
AACGCGGCAG CGCTGGCGGA GGGCTCGGCC AAGTACGCCG AGCTGGTCCG CCGCCTCCAG
GAGATCGGCG TCGCGTCAGG CTCGCCGACG CGGACGGTGG TGTTCGCCGA ACGAGTAGCC
ACCCTCACCT GGCTGCACAA GAACCTGCCG GCCGACCTCG GCCTGCCCGC CGGAGCCGTC
GCCATCATGC ACGGTGGCCT GCCCGACGAC GAGCAGCAGC AGATCGTCGA CGCCTTCAAG
CAGGAACACG CCGCGATCCG CGTCCTGGTC ACCGGCGACG TCGCCTCCGA AGGAGTCAAC
CTGCACGCCC AGTGCCATCA CCTGATCCAC TACGACATCC CATGGAGTCT CATCCGGATC
GAGCAGCGCA ACGGCCGCAT CGACCGCTAC CGCCAGCGAC AACCACCGCG GATCATCGCC
CTGCTGCTGG ACCCGGACAG TGGCCGGTTC GCCGGCGACA TCCGCATCCT GGCGAAACTC
GTCGACAAGG AGAACGAGGC GCACCGCGCG CTCGGCGACG TCGCCTCGCT GATGGGCCAG
TACGACGTCA AGGGCGAGGA GGACACCATC CGTGCCGTCC TGGCCGGGCA GCGCGACCTG
GACGACGTGG TGCGTATGCC GGAAGAGGTG CTGGCCGGTG ATGACCTGTC GGCGATGTTC
TTCGGCATCG TCGATGCTGA CGACGACGCG GAAACGGCAC CGCTGCCCGA GACGACCGTG
ACCCCGGGCT CCGGGCTCTA CCCCGACGAG GTCTCCTACC TCGAAGAGGC GTTGCACGCC
GCCTTCGTCG ACCCGACCGG CCCGCCGAGC AACAACGGCG TTGCCTGGCG CCGCGACGCC
GCCTTCGGCA CCGCCGAGCT GACACCGCCA CCGGACCTGG TGCAACGCCT TGAGGTCCTG
CCGCAGAGCT ATCTCGCCGA CCGGCGGGTC ACCGAAAGGC TCGTCCTGGC CACCACCCTC
GCCCGGGGCA GGAACCGTAT GGAGCAGGCG CTGTGCGATG AGACCGGTTC CAGTTGGCCG
GACGCGCACT ATCTGGGTCC ACTGCATCCG GTGCTGGACT GGGCCTCGGA CCGCGCTCTG
GCCGGGCTGG GCCGCAATCA GGTGTTCGCG GTCCGCGGTG GTGTCTACGA CCCGACCGTG
CTGCTGCTGG GCACGCTCAC CAACCGGCGC GGGCAGGTCG TCTCGGCGGC GTGGATGACC
GTCGAGTTCC CGATGCCCGA CACCCTCTCG TTCGCCCCGG TGACCCCGCA CCCGTCGGCC
GCCGCGGCAC TGGCCGCGCT GGGTTTCGAC ACCGCGCGGG CCAACCCCGG TCCGGTGCCG
GATGCCGAGG CCCTGGACCG GTTCATCGCC CCGGCGGTGC GGCACGCCCG TGCGCAGATG
CGCGACCTGT TCGCTGCGGC CGAGAAAGAC GTCGCCCACC GGGTCGAGCA GTGGTCGCAC
CGGTTGGCCC AGTGGCAGGA CGAGGCAGAC GCGCTCATCC AGCGCCGCGA TCTCAAGCAG
CGCCGGGTCA GCATCGCGCA GGAGCAGCGG CTGGTGGCCG ACATGAACCC GGATCGGCAA
CTGGTCCGCC CACTGCTGGT CGTCGTGCCG GAGATCGGAG CCACCGCATG A
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| Protein sequence | MNDVRSESAL DVAPGSVVVI RDEEWLVQTA EETADGLLVH VRGLGELVRD VTASFCASLD
HIAPLDPAAA RVVADDSPRY RKARLWLEST YRKTAVPLAD RSLTVATQAL ATPLRYQQTA
VRKALDPDNL RPRILLADAV GLGKTLEIGM ILSELVRRGR GERILIVTPR HVLEQTQQEL
WSRFALPFVR LDSAGIQRVR QKLPANRNPF TYFRRAIISI DTLKSERYAA SLKKQRWDAV
VIDESHNLAN AATQNNRLAR TLARNTETMI LASATPHNGR KESFAELVRL LDPSAIPPGG
DLVAAEIERL VIRRHRHSDE VASAVGADWA ERQEPENVLV AASRAENAVA REIEDVWLWP
PDQRTPYSGQ NASLFPWTLA KAFLSSPAAL AETIRQRLAR LGHDAAASRE HAALNRLADL
NAAALAEGSA KYAELVRRLQ EIGVASGSPT RTVVFAERVA TLTWLHKNLP ADLGLPAGAV
AIMHGGLPDD EQQQIVDAFK QEHAAIRVLV TGDVASEGVN LHAQCHHLIH YDIPWSLIRI
EQRNGRIDRY RQRQPPRIIA LLLDPDSGRF AGDIRILAKL VDKENEAHRA LGDVASLMGQ
YDVKGEEDTI RAVLAGQRDL DDVVRMPEEV LAGDDLSAMF FGIVDADDDA ETAPLPETTV
TPGSGLYPDE VSYLEEALHA AFVDPTGPPS NNGVAWRRDA AFGTAELTPP PDLVQRLEVL
PQSYLADRRV TERLVLATTL ARGRNRMEQA LCDETGSSWP DAHYLGPLHP VLDWASDRAL
AGLGRNQVFA VRGGVYDPTV LLLGTLTNRR GQVVSAAWMT VEFPMPDTLS FAPVTPHPSA
AAALAALGFD TARANPGPVP DAEALDRFIA PAVRHARAQM RDLFAAAEKD VAHRVEQWSH
RLAQWQDEAD ALIQRRDLKQ RRVSIAQEQR LVADMNPDRQ LVRPLLVVVP EIGATA
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