Gene Sare_3005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3005 
Symbol 
ID5707615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3413064 
End bp3413669 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content72% 
IMG OID641272452 
ProductKDPG and KHG aldolase 
Protein accessionYP_001537820 
Protein GI159038567 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000148425 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGAGA CCACCGAGCC GGTCGTCGAG GCAGTCGGCC GCACGAGGAT CCTGCCGGTG 
GTCAGGACGC AAACGGCCGA CCACGCGCAC CGTCTCGTCA CGACACTCGT GACGGCGGGC
ATTGGCGTGG TCGAGGTGAC CGCGACGATC CCCGGCTGGT CCGAGGTGCT CGAGGCCGCC
ACCGCCGAGT ATCCACTTTG CGTGGTCGGT GCCGGCACAA TCACCACCGC CGTGGCCGCC
GAGCAGGCTC TGGAGCGCGG TGCCCGCTTC CTTGTCAGCC CCTATCCGGC GCCTGAGGTG
CGCAGCGTCG CGGCCCGGGC GCGCACACTC TTCATCGAAG GCGGCCTCAC TCCGAGCGAG
GTCGCCGCAG CCGCAAGCCA GGGCGTCGCC AAGCTGTTCC CGGCGCACGT CGCAGGCCCG
GCCTACCTGC GCAGCCTGTT GGCCGTGGTG CCCGGCGCCC GCGTCGTCCC CACCGGCGGC
ATCCCACTGG ATGACGTCCC CCGATGGCTC GCCGCCGGAG CCTTCGCGGT CGGCGTCGGC
AACGACCTCT TCTCGGGCGA CCTGCCGGAA CGGCTCGCGT CGCTGGGCAT CGGCGGGTCG
GCATGA
 
Protein sequence
MSETTEPVVE AVGRTRILPV VRTQTADHAH RLVTTLVTAG IGVVEVTATI PGWSEVLEAA 
TAEYPLCVVG AGTITTAVAA EQALERGARF LVSPYPAPEV RSVAARARTL FIEGGLTPSE
VAAAASQGVA KLFPAHVAGP AYLRSLLAVV PGARVVPTGG IPLDDVPRWL AAGAFAVGVG
NDLFSGDLPE RLASLGIGGS A