Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2987 |
Symbol | |
ID | 5707635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3393011 |
End bp | 3394678 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641272434 |
Product | ABC transporter related |
Protein accession | YP_001537802 |
Protein GI | 159038549 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000223105 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCATCC ACACCACCGC ACCCGTCCTG TGCACTGGCC TGTCGTTCGC CTGGCCGGAC GGCACGCAGG TTCTGGACGA TCTTTCGTGG GCAGCCAGGG AAGGCAGTAC CGGCCTGATC GGGCGCAACG GCAGCGGGAA ATCCACCCTC CTGCGATTGA TCGCCGGTCG GCTCCTTCCC TCCTCGGGCA CCGTCCACGT CGCCGGCAAT CCCGGCTACC TGTCCCAGGA CCTCACCTTT GATCCCGCGA TGCGCGTGGA AGAGGTGCTG GGTGTCGCCT CCGTACGTGC CGCCCTGCAC GCGATCGAAG CCGGCGATGC CAGCGAGGAC CACTTCACCG CCCTAGGCGA CCAGTGGGAC GTGGAAGAAC GCACCCACGC TGCCCTGGCC CGCCTGGGCC TGGGTCACAT TAGGCTGGAC CGCACCGTCG GCGAGATCTC CGGCGGCGAA GCAGTCCTGC TGCGCTTGGC CGCCCTTCTG CTGGCCCGCC CCGTCGTCCT GCTGCTGGAC GAGCCGACCA ACAACCTCGA CCGCCATGCT CGCCACCGCC TCTACGACGC GGTCACCGGC TACCGGGGCA CCGTCATCGT CGTGACCCAC GACCGCGAGC TGCTGGAGCG CGTTGACCAG ATCGCCGAGC TGCGCACCGG AACCGTGCGC ACCTTCGGCG GCAACCTGAC AGCCTATGAG GACACCATCG CTGCCGAGCA GGAAGCTGCT GAGCGGGCTC ACGCCACCGC CCGCGCCGAC CTCGCCCGGC AGCGCCGCGA TCTGGCCGCC GCGCAGACGA GGCAGGCCCG CAGCGCCCGC TACGGCAAGC AGATGTACGC CGACAACCGG CTGGACAAAG CTTCCGCCCA GACCATGAAG CGTGCCGCCC AGGTCTCACG CGGCAAGCAA CAGGCCGTCC ACGACCAGCG CCTGGCGGAC GCCAAGGAGC ACCTGGACAC GACCGAGGAC CGGCTCCGCG ACGACGACAC CATCCGCATC GACTTACCGG ACACCACCGT TACGCCCCAC CGCACCGTCC TGACCGTCGA TCGCGCCCGT CTGCGCACCG GCCGCAAGGT CGACGACCTG CGGGTTCACG GGCCCGAGCG CATTGCGCTC ACCGGCCGCA ACGGCGCCGG GAAGACCACC CTCCTGCGTA CCATTGCCGG ACAGCTTCCG CCCGCGGAGG GCGAGGTCTG TGTCCATGTC GCGCTGCGCT ATCTGCCACA GCGACTGGAC CTGCTCGACG GCCAGCGGAC AATCTTCGAC AACGTCGCCC ATCTCAACCC GCACGCCACC GGAAACCAGA TCCGTGCCCA GCTGGCCCGT TTCCTGTTCA AGGGCGGCCG CGCCGATCAG CTGGTGGACA CGCTTTCGGG AGGAGAGCGC TTCCGCGCGA CGCTGGCGGC GCTACTGCTG GCCGACCCCG CTCCTCAGCT GCTTCTACTG GACGAGCCAA CCAATAGTCT CGACATGGAC AGCGTCGGCC AGCTTGCCCA AGCGCTGGCC GGCTACCGGG GCGCGCTGGT CGTCGTCAGC CACGACTTCC CGTTTCTTCG GCAGATTGGC ATCACCCGCT GGCTGGACCT CGATGATGAC GCGGCTGTGG AAGCATCCGA GGAAGCTGCG GATCAGAAGG TCAGGGGTTC GAATCCCTTC GGGCGCCCAA GATCGTAA
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Protein sequence | MSIHTTAPVL CTGLSFAWPD GTQVLDDLSW AAREGSTGLI GRNGSGKSTL LRLIAGRLLP SSGTVHVAGN PGYLSQDLTF DPAMRVEEVL GVASVRAALH AIEAGDASED HFTALGDQWD VEERTHAALA RLGLGHIRLD RTVGEISGGE AVLLRLAALL LARPVVLLLD EPTNNLDRHA RHRLYDAVTG YRGTVIVVTH DRELLERVDQ IAELRTGTVR TFGGNLTAYE DTIAAEQEAA ERAHATARAD LARQRRDLAA AQTRQARSAR YGKQMYADNR LDKASAQTMK RAAQVSRGKQ QAVHDQRLAD AKEHLDTTED RLRDDDTIRI DLPDTTVTPH RTVLTVDRAR LRTGRKVDDL RVHGPERIAL TGRNGAGKTT LLRTIAGQLP PAEGEVCVHV ALRYLPQRLD LLDGQRTIFD NVAHLNPHAT GNQIRAQLAR FLFKGGRADQ LVDTLSGGER FRATLAALLL ADPAPQLLLL DEPTNSLDMD SVGQLAQALA GYRGALVVVS HDFPFLRQIG ITRWLDLDDD AAVEASEEAA DQKVRGSNPF GRPRS
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