Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2958 |
Symbol | |
ID | 5707812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 3355974 |
End bp | 3357389 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641272407 |
Product | adenylosuccinate lyase |
Protein accession | YP_001537775 |
Protein GI | 159038522 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0015] Adenylosuccinate lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.121926 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00625137 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTGTCA CGCACCGCCT CGTCCATTCC GTCGATAGCT GCGCTCACGA GCGGGGACAC ATCACCGACT CACGGTTCTA CGGCAACCGG TACGCCACGT CCGGCAGCCG GCGCATCTAC TGCGACGTCT GCCGCAAGCA GCGCTGGCTG GACATCGAGG CGGCACTGGC CCAGGCCCAA GGCGAGCTGG GCATGATTCC CGCTCGGGCC GTGGCGGGGA TCGTGTCCGC GGCCCGACTC GAGTGCATCG ACCTCGACGC GGTGCAGGCG GAGATCGACC GGTCGGGGCA CTCCCTGGTC GGGCTGCTCC GGGTCCTCCA GGTCGCCTGC CCTGACGACA CCGGCGAGTA CATCCACTTC GGTGCGACCA CGCAGGACAT TCAGGACACG GGTCAGGCCC TCGAGATGCG GGACACCCTG GACGAGTTGA CCCGGGAGAT CGCCGCGATC CTCGCCAGTC TGGTCGAGCT GGCCGAACAG CACGCCGGGA CGGTCGCGGT CGGACGGACG CACGCCCGGG CGGCGCTGCC GATGAGCTTC GGCCTCAAGG TCGCTAGCTG GATCGACGAG CTGTTACGGC ACACCGAACG GCTCGCCACG GCACGATCCC GCGTCGTGGT GGCCCAGCTG TTCGGCGGCG CCGGCACGAT GGCCGGGTTC GGCGGCGGCG GGGTTGTCCT GCTGGAACGC TTCGCCGCCC GCCTCGGTCT CGCCGTGCCC ACCCTCGGCT GGCACGTCGC CCGCGACCGG GTGGTCGAGT TCGTCACCAC GCTGGCCATG GTCAGCGGCA CGCTGGGCCG CGTCGCCGAC GAGATCCGCA CCATCGGTCG GCCCGAGTTC GGTGAGGTCA CCGAACCCTG GCGGTACGGC AAGGTCGGGT CCAGCACGAT GCCGCACAAG CGGAACCCGG AGCGCTGTGA GCAGGTCGTC GTGATGGCCA AGCTGGCGGC GGCCCAGGCG GGGATCGCCT TCACCGCGAT GGTCGGTGAC CACGAGCGGG ACGCGCGTGC GCTGCGGGTG GAGTGGGCGT GTGTCCCGGA CGTCTCGCAC TACACCCTGG CGGCCTGCGA GATCGTCCGG GAACTGGTCA CGGGCCTGAC CGTGCACGAG GACCGGCTGC GGGTCAACGC GCAGGAGGTT GCCGACCAGC TGGCCACCGA ACGGCTGATG CTGGCGCTCG GTCGACAGCT CGGCAAGCAG ACCGCGCACG AGCGGGTCTA CGAACTCAGC CAGACCGCCC ACGACACCGG CCGCCCGCTG CGCCACCTCT TCGACGACTG CGCCGACCTG CGCGACCTCG TCGACGAACG GGAGCTGGAT GTCATCTTCG ACCCCAGTCA GTACCTGGGC GCCTCAACCG ACCTGACCCA CCGGGCCCTC GCCGAGGCCC GTAAGTGGCT CGGGGCGCGC GGGTGA
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Protein sequence | MSVTHRLVHS VDSCAHERGH ITDSRFYGNR YATSGSRRIY CDVCRKQRWL DIEAALAQAQ GELGMIPARA VAGIVSAARL ECIDLDAVQA EIDRSGHSLV GLLRVLQVAC PDDTGEYIHF GATTQDIQDT GQALEMRDTL DELTREIAAI LASLVELAEQ HAGTVAVGRT HARAALPMSF GLKVASWIDE LLRHTERLAT ARSRVVVAQL FGGAGTMAGF GGGGVVLLER FAARLGLAVP TLGWHVARDR VVEFVTTLAM VSGTLGRVAD EIRTIGRPEF GEVTEPWRYG KVGSSTMPHK RNPERCEQVV VMAKLAAAQA GIAFTAMVGD HERDARALRV EWACVPDVSH YTLAACEIVR ELVTGLTVHE DRLRVNAQEV ADQLATERLM LALGRQLGKQ TAHERVYELS QTAHDTGRPL RHLFDDCADL RDLVDERELD VIFDPSQYLG ASTDLTHRAL AEARKWLGAR G
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