| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2956 |
|---|
| Symbol | |
|---|
| ID | 5707810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 3353374 |
|---|
| End bp | 3354771 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641272405 |
|---|
| Product | cystathionine beta-synthase |
|---|
| Protein accession | YP_001537773 |
|---|
| Protein GI | 159038520 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | [TIGR01137] cystathionine beta-synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.192465 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0470778 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGC ACGAGTCGTT GACGGAACTG ATCGGCGACA CCCCGCTGGT CCGCCTCCGC
AGGGTCGTCG CCCCGAGGTC CGCCCCGCTG TACGCCAAGG TCGAGTACCT CAACCCGGGC
GGGTCGGTGA AGGACCGGAT CGCGTTGCGC ATGGTGGAGG CGGCCGAGGC CGACGGCCTG
CTGCGGCCGG GCGGAACCCT GGTCGAGCCG ACGTCCGGCA ACACCGGTGT CGGACTGGCC
ATCGTCGCTC AGCAGAAGGG CTACCGCTGC GTCTTCACCT GCCCGGACAA GGTCTCCCAG
GACAAGATCG ACGTGCTGCG GGCATACGGC GCCGAGGTGA TCGTCTGTCC CGCCGCGGTC
CGGCCGGAGC ACCCGGCGTC CTACCGCAGC CAGGCGACCC GGGTCGCCGC AGAGCGTCCC
GGGGCGGTTC AGCTGAACCA GTACGCCAAC GGCAACAACC CGGACTCCCA CTACCGGGGC
ACCGGGCCGG AACTGTGGCG GCAGACGGAG GGTCGGCTGA CCCACTTCGT TACCGGCATC
GGCACCGGCG GCACGATCTC TGGTACCGGT CGCTACCTCA AGGAGGTCTC CGGCGGCGCG
GTGCAGATCG TCGGTGTCGA CCCGGACGGC TCGATCTACT CGGGCGGAGA GGGCCGGCCC
TACCTGCTGG AGGGGGTCGG CCAGCCCAGC TTTCCGGCAT CGTACGACTC CACGGTGGTC
GACGAGGTCA TCGCCGTGAC CGACGCCGAG GCGATCCTGA TGACCCGTCG CCTGGCCCGG
GAGGAGGCGC TGCTGACCGG CGGCTCCGGG GGCATGGCCG CCGAGGCCGC GGTGCGGGTC
GCCGCCGGGC TCGGCCCAGG GACGCTTGCG GTTGTTCTGA TCCCCGACTC CGGCCGCGGC
TACCTGTCCA AGATCTTCAA CGACAGCTGG TTGGCCGGGC TCGGCCTGTA CGACCCGCCG
ACCACCCGGC CCCGGGTCCG TGACGTCGCG CCGGCCGGTC CGCTTCCGCT GATCCGACCG
GACGAGACCC TCGCCAACGC CGTCAAGACC CTGCGCGCCA CGGAGGGGGG CCACCTGCTG
GTAAGCGCCG CGCCGCCGCC GGTCCGGCTG GCCGAGATCC TGGGCACCGT GACCGACGCC
GTGCTGGTCG CCGCTCTCGC CGGTGGTGCG GACCTCGGTG ACCCGATCGG GGCGCACCTG
AACCCGCCGC CACCGCAGGT CGGCGCCGGG CAACCGCTGT CGGCGGTGAC CGAGATGCTG
TCGGATCCGT CGTCCGCCGT CCTGGTGGTG GACGGCGGAC TCCCATGTTG CCTGCTGACC
GCCGCGGACC TCGTCGCGTT GCTGGCCACG CGACGACCGG ACGCGGCAGC CCGATCGCCT
GTGCTGGGGG GAACGTGA
|
|---|
| Protein sequence | MSMHESLTEL IGDTPLVRLR RVVAPRSAPL YAKVEYLNPG GSVKDRIALR MVEAAEADGL
LRPGGTLVEP TSGNTGVGLA IVAQQKGYRC VFTCPDKVSQ DKIDVLRAYG AEVIVCPAAV
RPEHPASYRS QATRVAAERP GAVQLNQYAN GNNPDSHYRG TGPELWRQTE GRLTHFVTGI
GTGGTISGTG RYLKEVSGGA VQIVGVDPDG SIYSGGEGRP YLLEGVGQPS FPASYDSTVV
DEVIAVTDAE AILMTRRLAR EEALLTGGSG GMAAEAAVRV AAGLGPGTLA VVLIPDSGRG
YLSKIFNDSW LAGLGLYDPP TTRPRVRDVA PAGPLPLIRP DETLANAVKT LRATEGGHLL
VSAAPPPVRL AEILGTVTDA VLVAALAGGA DLGDPIGAHL NPPPPQVGAG QPLSAVTEML
SDPSSAVLVV DGGLPCCLLT AADLVALLAT RRPDAAARSP VLGGT
|
|---|
| |