| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2949 |
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| Symbol | |
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| ID | 5707827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 3344541 |
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| End bp | 3346049 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641272398 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_001537766 |
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| Protein GI | 159038513 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.442662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.020472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGCGT CGAGCATCGA TGCCTTCGTG GCCACGACCG ACCCACGCAG CATGGCGCAC
CTCAGAACGC TGGTCGACGA CGTTCTGGGC CTCCTGGCCG AGGCCGGGTC CGGGCGCACG
GGCCCGGTCC CCACCGGCGG CCCGGCTGCG GCGCGGGCCT ACGCCGACGA CGTGCTGGCC
GAGCCGCTAC TGCCAACCGC TGGTGGTAAG CCGGATGACG CCCTGCGCCA GCTGGTCGAG
GCGTACGCGA CGTGGGCGGT CGACGTCAGC CACCCAGCCA CCGTTGCCCG GATGCAGTGT
CCGCCGGCGA CCGTCGCCGT CGCCGCGGAT CTGGTGGTCA CCGCGCTGAA CCAGTCGATG
CACGCCTGGG AGGCAGGGCC GTTCGCCGTG GAACTGGAGC GGCGTCTCAT CGCGGACCTC
GCCGGCCTGG TCGGCTACGG CCCGGACGCC GGTGGCACGG TCACCGCCGG TGGCAGCATC
TCCAACATCA TGGCGATGCT GATCGCCCGG GACGAGGCGT ACGCACGACG GTTCGGCCGA
TCCGCGTTCC ACACTGGTGT CGCGGCCTCC GGCGTGCGAC CCGTGGTGCT CTGCACCGAG
ACCGTGCACT TCTCGGTCGA CCGCGGCGCG AGTATCGCCG GGATCGGTTC CGACGGCATC
ATCCGGGTGC CGGCGGACGA GCTGGGGCGC ATGCTCCCGG CCGAAGCCGA CCGGGTACTG
CGCGAGCTTC CCGCCGACCT GCTGCCGGTG ATGCTCTTCG TCTGCGCCGG TTCGACCGAC
TTCGGCTGGG TCGACCCGCT GCCGGCGATC GCCGAGGTCG CCCGCCGCCA CGGGGTGTGG
CTGCACGCCG ATGCCGCGTA CGGCGGGGGT GCACTCTTCT CCGACCGGCT GCGTCCGCTC
TTCGACGGCA TCGCTGAGGC GGACTCGGTC ACCCTGGACC TGCACAAGTT CGGCTGGGTA
CCGGCCTCCG CGGGGCTCTT CCTGACCCGT GACGCCGCCG CTTTGGATCA TCTGGCGGCC
CAGCAGACCA GCCTCAACGC CGCAGACGAC GTCGCTGAAG GCTTCATCGG TCGGTACGGC
TCGTCGATCC AGGCGACCCG CCGCTGCGAC GCGCTGAAGA TCGCAGTCAC GCTACGCGGG
AGCGGCCGGC AGGGCATCGG CGCGATGGTG GAGGCCTGCC ACGAGCTGTC CCGCTTCGGC
GCCGCCCGGG TGGCCCGCGA GCCTCGGCTC GAGCTGGCCG CGGAGCCGGT GTTGAGCACC
GTGCTCTTCC GCTACCTGCC AGAGCGGGAG ACCGACCTCG ACGAGTTCAA CAGCACGCTG
CGCCGTCGGC TGATGCGCAA CGGGCAGGCC ATGCTCGCCC GGGTCATCCT GCCGAGACCC
GGCGGCGGCA AGGCGGTCTG GCTCAAGCTC ATGCTGCTCA ACCCGGCCAC CGAGCCGGGG
CAACTCGACC AGGTCATCGA CGACGTACTG GCCGCCGGCG CCCTGCTGGA AGCGGCAGCC
GCCAGCTGA
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| Protein sequence | MSASSIDAFV ATTDPRSMAH LRTLVDDVLG LLAEAGSGRT GPVPTGGPAA ARAYADDVLA
EPLLPTAGGK PDDALRQLVE AYATWAVDVS HPATVARMQC PPATVAVAAD LVVTALNQSM
HAWEAGPFAV ELERRLIADL AGLVGYGPDA GGTVTAGGSI SNIMAMLIAR DEAYARRFGR
SAFHTGVAAS GVRPVVLCTE TVHFSVDRGA SIAGIGSDGI IRVPADELGR MLPAEADRVL
RELPADLLPV MLFVCAGSTD FGWVDPLPAI AEVARRHGVW LHADAAYGGG ALFSDRLRPL
FDGIAEADSV TLDLHKFGWV PASAGLFLTR DAAALDHLAA QQTSLNAADD VAEGFIGRYG
SSIQATRRCD ALKIAVTLRG SGRQGIGAMV EACHELSRFG AARVAREPRL ELAAEPVLST
VLFRYLPERE TDLDEFNSTL RRRLMRNGQA MLARVILPRP GGGKAVWLKL MLLNPATEPG
QLDQVIDDVL AAGALLEAAA AS
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