Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2946 |
Symbol | |
ID | 5707824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3338154 |
End bp | 3339350 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641272395 |
Product | low temperature requirement A |
Protein accession | YP_001537763 |
Protein GI | 159038510 |
COG category | [S] Function unknown |
COG ID | [COG4292] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.830285 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0563456 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAGT CGCGCACCCC GCTGCGGAAA CCCGGGCAGC CGCAGCAGGT GACCTTCCTG GAGCTCTTCT TCGACCTCGT CTTCGTCTTC GCCCTCACCC GCGTGTCGCA GCGACTGGCT GAGGACCTCA CCGCTCAACG GCAGATCGTG CTCACCGAGG CCGGCCAGAC GCTGTTGTTG TTGCTGGCCC TGCTGATGGT CTGGTTCACC ACGGCCTGGG TGACCGACCT GTTCGACCCG AATCGGCCGG AGATCGAACT TCTGGTCTTC GCGACCATGC TCGGCAGCCT GGTGATGGCA GTCGCGACTC CCGAGGCGTT CGGCACGCGC GCCGTCGCCT TCGCCGGTGC GTACGTCGCG ATCCACCTCA GTCGTGGCCT CGTGCTCGTG ATCGCCCTGC GCGGTCACGA GGCGCAGCGC CGCGCCGCGC TGACGCTGCT GTGGTACGGA GTGTCCGCGA TACCGTGGCT CGGCGGGGCA CTGCTCTTTC CGGAGAGCAC GGCGCGCGGC CTTCTGTGGA CCCTGGCCAT CATTATCGAC TACACGGGTG CCGCGGTGCG TTTTCCCACG CTGCGGCGGG CCCAGCGGCC ACACGAGGCG CCCATCGTGG CCGAACACCT CGCCGAGCGC TACCGGCAGT TCTTCATCGT CGCGCTGGGC GAACTCATTC TGGTTATCGG CGCGACGTAC AGTGGCATCG GCTTCGGTCT CGGCCAGACC GCGGCGTTCC TGGTGGCGTT CGCCACCACG GCACTGATGT GGCGGATCTA CATTCACCGA GCCGGAGAGC TGCTACCCCT CGCGATCGCG AGGGCCCGCG TACCATCGCG CCTCGCCGGG CTGTCGACAC CCGCCCACCT GCTGATGGTG TCTGGCATCG TGGCGATCGC GGTCGGCGAC GAGCTCGTTA TCGAGCATCC GACCGGACAC ACCGATTCGG CCTGGGTCGC CGTGATTCTC GGCGGACCGA TACTCTTCCT GGCCGGCCGT GCCGTGTTCG AGTACGCGGT GTTCGGCCGC GTGTCCGCGT CCCGGGTGAT CGGCGCGGTC GTGCTTGCCG CTGTCTCACC GGCAATGGTC CGTACACCGC CGCTGGTGGT TCTCTGCGTC CCCGCTTTCG TCTTGACGGC AATAGCCGTG TCGGACACTC TTCGTGCTCG AAGACGTCCC CCCGAAGTGC CGGCACCCCC TGTCTGA
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Protein sequence | MSQSRTPLRK PGQPQQVTFL ELFFDLVFVF ALTRVSQRLA EDLTAQRQIV LTEAGQTLLL LLALLMVWFT TAWVTDLFDP NRPEIELLVF ATMLGSLVMA VATPEAFGTR AVAFAGAYVA IHLSRGLVLV IALRGHEAQR RAALTLLWYG VSAIPWLGGA LLFPESTARG LLWTLAIIID YTGAAVRFPT LRRAQRPHEA PIVAEHLAER YRQFFIVALG ELILVIGATY SGIGFGLGQT AAFLVAFATT ALMWRIYIHR AGELLPLAIA RARVPSRLAG LSTPAHLLMV SGIVAIAVGD ELVIEHPTGH TDSAWVAVIL GGPILFLAGR AVFEYAVFGR VSASRVIGAV VLAAVSPAMV RTPPLVVLCV PAFVLTAIAV SDTLRARRRP PEVPAPPV
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