Gene Sare_2946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2946 
Symbol 
ID5707824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3338154 
End bp3339350 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content67% 
IMG OID641272395 
Productlow temperature requirement A 
Protein accessionYP_001537763 
Protein GI159038510 
COG category[S] Function unknown 
COG ID[COG4292] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.830285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0563456 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGT CGCGCACCCC GCTGCGGAAA CCCGGGCAGC CGCAGCAGGT GACCTTCCTG 
GAGCTCTTCT TCGACCTCGT CTTCGTCTTC GCCCTCACCC GCGTGTCGCA GCGACTGGCT
GAGGACCTCA CCGCTCAACG GCAGATCGTG CTCACCGAGG CCGGCCAGAC GCTGTTGTTG
TTGCTGGCCC TGCTGATGGT CTGGTTCACC ACGGCCTGGG TGACCGACCT GTTCGACCCG
AATCGGCCGG AGATCGAACT TCTGGTCTTC GCGACCATGC TCGGCAGCCT GGTGATGGCA
GTCGCGACTC CCGAGGCGTT CGGCACGCGC GCCGTCGCCT TCGCCGGTGC GTACGTCGCG
ATCCACCTCA GTCGTGGCCT CGTGCTCGTG ATCGCCCTGC GCGGTCACGA GGCGCAGCGC
CGCGCCGCGC TGACGCTGCT GTGGTACGGA GTGTCCGCGA TACCGTGGCT CGGCGGGGCA
CTGCTCTTTC CGGAGAGCAC GGCGCGCGGC CTTCTGTGGA CCCTGGCCAT CATTATCGAC
TACACGGGTG CCGCGGTGCG TTTTCCCACG CTGCGGCGGG CCCAGCGGCC ACACGAGGCG
CCCATCGTGG CCGAACACCT CGCCGAGCGC TACCGGCAGT TCTTCATCGT CGCGCTGGGC
GAACTCATTC TGGTTATCGG CGCGACGTAC AGTGGCATCG GCTTCGGTCT CGGCCAGACC
GCGGCGTTCC TGGTGGCGTT CGCCACCACG GCACTGATGT GGCGGATCTA CATTCACCGA
GCCGGAGAGC TGCTACCCCT CGCGATCGCG AGGGCCCGCG TACCATCGCG CCTCGCCGGG
CTGTCGACAC CCGCCCACCT GCTGATGGTG TCTGGCATCG TGGCGATCGC GGTCGGCGAC
GAGCTCGTTA TCGAGCATCC GACCGGACAC ACCGATTCGG CCTGGGTCGC CGTGATTCTC
GGCGGACCGA TACTCTTCCT GGCCGGCCGT GCCGTGTTCG AGTACGCGGT GTTCGGCCGC
GTGTCCGCGT CCCGGGTGAT CGGCGCGGTC GTGCTTGCCG CTGTCTCACC GGCAATGGTC
CGTACACCGC CGCTGGTGGT TCTCTGCGTC CCCGCTTTCG TCTTGACGGC AATAGCCGTG
TCGGACACTC TTCGTGCTCG AAGACGTCCC CCCGAAGTGC CGGCACCCCC TGTCTGA
 
Protein sequence
MSQSRTPLRK PGQPQQVTFL ELFFDLVFVF ALTRVSQRLA EDLTAQRQIV LTEAGQTLLL 
LLALLMVWFT TAWVTDLFDP NRPEIELLVF ATMLGSLVMA VATPEAFGTR AVAFAGAYVA
IHLSRGLVLV IALRGHEAQR RAALTLLWYG VSAIPWLGGA LLFPESTARG LLWTLAIIID
YTGAAVRFPT LRRAQRPHEA PIVAEHLAER YRQFFIVALG ELILVIGATY SGIGFGLGQT
AAFLVAFATT ALMWRIYIHR AGELLPLAIA RARVPSRLAG LSTPAHLLMV SGIVAIAVGD
ELVIEHPTGH TDSAWVAVIL GGPILFLAGR AVFEYAVFGR VSASRVIGAV VLAAVSPAMV
RTPPLVVLCV PAFVLTAIAV SDTLRARRRP PEVPAPPV