Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2945 |
Symbol | |
ID | 5707823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 3336882 |
End bp | 3338018 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641272394 |
Product | DegT/DnrJ/EryC1/StrS aminotransferase |
Protein accession | YP_001537762 |
Protein GI | 159038509 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0201539 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCCTC TCTTCAAGGT CGCGATGACG CCCGGCGCCG CCGACGCGGT CACCGAGGTC CTCCGGAGCG GCCGTCTGGA GCACGGTCCC GTGGCCGCGA ACTTCGAAAC GGCCCTCGCC GAACGAATCG GCAACCCCCG AGTACTCACT CTCAATTCGG GCACCTCCGG CCTGCATCTG GCGATCGACC TGGCTACCAG ACCCGCCCGT GGCGCAGGGG TGCCAGCCGA CGACGTACCC GGTGAGATTC TCAGCACGCC CCTCACGTTC GAAGGGACGA ACTGGCCGAT CCTTGCGAGT GGTCGGCGCA TTCGCTGGAT CGACGTCGAT CCGCGGACCC TGAACGTGGA CCTCGACGAC CTGGAGAGCA AGATTTCGCC CGCCTGCCGC GCGATCATGG TCGTCCATTG GGCGGGCTAT CCGGTGGACC TCAACCGACT GCGGGCCATC GTGGATCGAG CTGAGGTGCG ACACGGGATA CGGCCCGTGG TGATCGAGGA CTGCGCCCAG GCATGGGCGG CGACGTACGA CGGGCTGCCC CTGGGCAGGC ACGGCAATGT CTCGGTATTC AGCTTCGGGG CACTGAAGCC GCTCACGTGC GGTAGCGGCG GCCTTATCGT GGTTCCCGAC GACGAGATGT ACGACCGTGC CCGGCTGCGG CGGTGGTTCG GCATCGACCG TCAGGCTGAT CGCACCACGG GTGACTACGA CGTGGCGGAC TGGGGCTTTC GCTTCTACAT GAACGACGTC GCCGCGGCGA TAGGACTGGC GAATCTGGTG GCGGCCGACG GCCTGATAGA GCGGTCTCGG GCCAACGCCG CCTTCTTCGA TCGCGAGTTG GCGGGTGTGC CGGGGCTGCG GCAGACCGAA CGCTCCCCCG ACCGCGAACC GTCACACTGG ATCTATCCCG TCCTGATCGA CGACCGGTCG TCGTTCGTAC GAAAGCTCAC CGACTCCGCC ATCGCCACCG GCATCGTGTC TCGCCGCAAC GATGCGCACA GCTGTGTCGC CTCGGTGCGC GAACACCTTC CCGGATTGGA CTGGGTCGCC GACCGGCTCG CCTACCTGCC TGTGGGATGG TGGCTCAGCG AGGCCGACCG TGACCACGTC GTGAGCACGA TTCGGGCCGG ATGGTAG
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Protein sequence | MIPLFKVAMT PGAADAVTEV LRSGRLEHGP VAANFETALA ERIGNPRVLT LNSGTSGLHL AIDLATRPAR GAGVPADDVP GEILSTPLTF EGTNWPILAS GRRIRWIDVD PRTLNVDLDD LESKISPACR AIMVVHWAGY PVDLNRLRAI VDRAEVRHGI RPVVIEDCAQ AWAATYDGLP LGRHGNVSVF SFGALKPLTC GSGGLIVVPD DEMYDRARLR RWFGIDRQAD RTTGDYDVAD WGFRFYMNDV AAAIGLANLV AADGLIERSR ANAAFFDREL AGVPGLRQTE RSPDREPSHW IYPVLIDDRS SFVRKLTDSA IATGIVSRRN DAHSCVASVR EHLPGLDWVA DRLAYLPVGW WLSEADRDHV VSTIRAGW
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