| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2917 |
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| Symbol | |
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| ID | 5705037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 3299461 |
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| End bp | 3300606 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641272366 |
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| Product | RNA polymerase ECF-subfamily sigma factor |
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| Protein accession | YP_001537734 |
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| Protein GI | 159038481 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGGGG CGCTGCTGCG GGACCTCGTG CCCGCGGTGA TCGGTGTCCT CGTCCGGCGT
GGGGCCGACT TCACGTCGGC CGAGGATGCC GTGCAGGACG CCGTGGTCGA GGCCGTCCGG
GTGTGGCCGG ACGACCCGCC GCGGGATCCC AAGGGCTGGC TGGTCACGGT GGCCTGGCAC
AAGTTCCTCG ACACCGCCCG TGCAGATGCC TGCCGGCGGC GCCGCGAGGT ACGCCTTGAG
GGCGAGCCCA TGCCTGGGCC GGTCGCGGCG GTGGACGACA CGCTCCAGCT GTACTTTCTG
TGCGCTCACC CCTGCCTGAC GCCGGCATCG TCCGTTGCGC TCACGTTGCG TGCGGTCGGC
GGCCTGACCA CGCGGCAGAT CGCGCAGGCG TACCTCGTGC CGGAGCCGAC CATGGCTCAG
CGGATCAGTC GGGCGAAGCG CACCCTCTCG GGCGTCCGGT TCGATCAGCC CGGTGATGTC
GCCACGGTGC TGCGCGTGCT CTACCTGGTC TTCAACGAGG GCTACTCCGG CGACGTCGAC
CTCGCCGCCG AAGCGATCCG ACTTACCCGC CACCTAGCCT CCATGATCAA TCATGCGGAG
GTGGGCGGCC TGCTTGCACT CATGCTGTTG CACCACGCCC GGCGCCCGGC CCGCACCGGC
CCCGACGGCA GGCTTGTGCC CCTTGCCGAG CAGGATCGCG GCCGGTGGCG CAGCCATCTG
ATCGCCGAGG GTGTCCAGGT GCTCCAGGCA GCCCTCGCCC GAGACCGGCT GGGCGAGTTT
CAGGCCCAAG CCGCCATCGC CGCGCTCCAC GCCGACGCCC GGACGGTCGA CGAGACCGAC
TGGGTGCAGA TCGTCGAGTG GTATGACGAA CTGGTGCGAC TCACCGACAG CCCGGTGGCA
CGCCTCAACC GGGCCGTCGC GGTCGGCGAG GCAGACGGCC CGCGGACGGG CCTGGCCGCC
CTGGCGGAGC TCGATCCCGC CCTGCCCCGC CACGCCGCCG TCGCGGCTTA CCTGCACGAA
CGTGACGGTG ATCCAGTGGC CGCAGCGCGG CTCTACACCG AAGCTGCCCG ATCAGTGCCC
AGCCGCTCCG AACGCGACCA CCTCACACGG CAGGCCGCAC GACTCAACGC GCCGCGGCAA
ACCTGA
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| Protein sequence | MNGALLRDLV PAVIGVLVRR GADFTSAEDA VQDAVVEAVR VWPDDPPRDP KGWLVTVAWH
KFLDTARADA CRRRREVRLE GEPMPGPVAA VDDTLQLYFL CAHPCLTPAS SVALTLRAVG
GLTTRQIAQA YLVPEPTMAQ RISRAKRTLS GVRFDQPGDV ATVLRVLYLV FNEGYSGDVD
LAAEAIRLTR HLASMINHAE VGGLLALMLL HHARRPARTG PDGRLVPLAE QDRGRWRSHL
IAEGVQVLQA ALARDRLGEF QAQAAIAALH ADARTVDETD WVQIVEWYDE LVRLTDSPVA
RLNRAVAVGE ADGPRTGLAA LAELDPALPR HAAVAAYLHE RDGDPVAAAR LYTEAARSVP
SRSERDHLTR QAARLNAPRQ T
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