Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2896 |
Symbol | |
ID | 5706416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3279355 |
End bp | 3281523 |
Gene Length | 2169 bp |
Protein Length | 722 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641272345 |
Product | Alpha-amylase |
Protein accession | YP_001537713 |
Protein GI | 159038460 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.578872 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATCCG CGAAACCACA CCCGATTGGC CGCACCGGTC GGCTGTTGCT GGCCGCCGCA ATGGTGGCGG TCGGTGGCAC GGCGGTCGTC ACCACCGCGA TCACCGCTAC CTCCGCCCGC GCCGCCGTCG TCCTGAACGA CAGTGAGGTG ACCGCCAACC TGTGGGAGTG GAACTGGAAC TCGGTCGCCG CCGCCTGCAC CGACCACCTC GGCCCCGCCG GATACGGTGC GGTGCAGGTG GCCCCGCCGC AGGAGTCGGT CCGCCTACCC AACAGCAACG ACGGGACGCA CCCCTGGTAT GAGGTCTACC AGCCGGTGTC GTACCAGCTG GAGAGCCGGT TCGGCAGCCG CCAGCAGTTC GCCGGGATGG TCACCACCTG CCACGAGGCG GGCGTGCGGG TCTACGTCGA CACGGTGGTC AACCACATGG CCGGAACCAA CAACCCGCAG GGGACGCGTG GGTACGCCGG CACGGAGTTC TCGGGCTACG ACTACCCCGC GGTGCCCTAC GGTGCGGGGG ACTTCCACCG CCCGGGCGAC AACTGCCCGA CCGACGGCTC CATCAACGAC TGGGACAACG AGGCCCAGGT GACCAGCTGC GAACTGCTGT CCCTGGCGGA TCTCTACACC GAGAAGGAAT CCGTCCGGAA CAAGATCGCC AGCTACCTGA ACGACCTGAT CGGTCTCGGT GTCGACGGCT TCCGGGTGGA TGCGGTCAAG CACATCCGGA AGGACGACTT CGCGGCGATC CTCGGCAAGC TGAACAACAC CGTCGTGGAA GGGCGACGCC CCTACGTTGC CCAGGAGATC TTCGACGGTG CCAGCAATCC CGCCCTCCAG GCCCGCGCGT TCATCGGCAA CGGTGACGTA CTCGACTTCG CCTACGCCAA GGGCATCCGT TCGGCCTTCC AGGGCTCCAT CGCCACGCTG GCGAACATCC CGAACTGGAA CCTCGACGCA CCCAGCGCCA ACGTCTTCGC GATGGTCACC AACCATGACC TTGAGCGCGA CGGTGTGGTG TTGTCCTACA AGGACGGCAC CGACTACGTG CTCGCCAACT ACTTTGCCCT GGCCTACCCG CACGGCAGGC CGTCGGTGTA CGACAGCTTC ACCTGGTCGG ACCGCAACCA GTCCCCGCCG CACAACGGCG GCGGGTACGT CACCGACACG GTATGCGGCG GGACCTGGAA CTGCCTGAGC CAGACCACCG GTATCAAGGG CATGGTGGGT TGGGCCAACG CCGCGCGTCC GGTCCAGACC ATCGCCGACT TCACCGTGGT CAACGACAAC GTGATCGGCT TTCACCGGGG CGACCGGGCC TGGATCGGCA TCAACGACTC CGGCAGCGCC GTCAGCGCCA CCTTTACCAC CGGCCTCACC GACGGCGACT ACTGCGATGT CATCTCCGGG TCCGTCACCA GTAGCGGTTG CAGCGGCGGT ACGGTGACCG TCTCCGGCGG CCGGGCCACG GTGACCATCC CGGCGAACAA CGCCCTCGCC GTGCATGTCA ACGCCCGGCC CGGCGCGACC CCGTCGCCGA CGATCAGCCC CACCGGTGAC CCCACCGACC GGATCGCCAC GACCTTCACC GTCCACGCGA CACCCGGCGC CGACCAGGAG CTCCACGTCG TCGGCAGCAT TCCCGAACTG GGCTCCTGGG CCCCGGCCGA TGCCGTGCGG TTGATCCCGC AGGGCGGCAA CACCTACCGC GGCACGATCG ACCTACCTCC GTCGACCCAG GTCGAGTACA AGTTCATCAA GGTGACCGCC GCGGGTGGGG TGACCTGGGA GTCCGGGGCG AACCGGAGCT TGACCACCCC CGTCACCGGT ACGCACGCGG TGACCGAGAC CTTCCGGGGC GACTCGGTGC CGGGCTCGGC GATCGCCGCT TCGTTCAACG CCACTGTCAC CACCTTCTTC GGCCAGAACG TCTTCGTCGT CGGCAACGTC GCGGAGTTGG GTAGCTGGAA CCCGGACGAG GCCGTCGCGC TCTCCGCGGC CGACTACCCG GTCTGGCGGG CCACGGTGAA CCTGCCCTCG AACACCGCTA TCGAGTACAA GTACCTCAAA AAGAATCCGG ACGGGTTCGT GACCTGGGAG TCCGGGGCGA ACCGGAGCTT CACCACTCCG CCCACCGGAA CCCATACGAG CACCGACACC TGGCGCTAG
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Protein sequence | MESAKPHPIG RTGRLLLAAA MVAVGGTAVV TTAITATSAR AAVVLNDSEV TANLWEWNWN SVAAACTDHL GPAGYGAVQV APPQESVRLP NSNDGTHPWY EVYQPVSYQL ESRFGSRQQF AGMVTTCHEA GVRVYVDTVV NHMAGTNNPQ GTRGYAGTEF SGYDYPAVPY GAGDFHRPGD NCPTDGSIND WDNEAQVTSC ELLSLADLYT EKESVRNKIA SYLNDLIGLG VDGFRVDAVK HIRKDDFAAI LGKLNNTVVE GRRPYVAQEI FDGASNPALQ ARAFIGNGDV LDFAYAKGIR SAFQGSIATL ANIPNWNLDA PSANVFAMVT NHDLERDGVV LSYKDGTDYV LANYFALAYP HGRPSVYDSF TWSDRNQSPP HNGGGYVTDT VCGGTWNCLS QTTGIKGMVG WANAARPVQT IADFTVVNDN VIGFHRGDRA WIGINDSGSA VSATFTTGLT DGDYCDVISG SVTSSGCSGG TVTVSGGRAT VTIPANNALA VHVNARPGAT PSPTISPTGD PTDRIATTFT VHATPGADQE LHVVGSIPEL GSWAPADAVR LIPQGGNTYR GTIDLPPSTQ VEYKFIKVTA AGGVTWESGA NRSLTTPVTG THAVTETFRG DSVPGSAIAA SFNATVTTFF GQNVFVVGNV AELGSWNPDE AVALSAADYP VWRATVNLPS NTAIEYKYLK KNPDGFVTWE SGANRSFTTP PTGTHTSTDT WR
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