Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2884 |
Symbol | |
ID | 5704801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 3267382 |
End bp | 3269055 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641272333 |
Product | 3-ketosteroid-delta-1-dehydrogenase |
Protein accession | YP_001537701 |
Protein GI | 159038448 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.097907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGAAGC CAGGGGACAA CGTCGATGTG GTCGTGGTCG GCAGCGGTGG CGCGGGCATG GTCGCGGCAC TCGCTGCGGC ACACCGGGGG CTGAGCACAG TCGTGCTGGA GAAGTCCGAG CAATATGGTG GATCCACCGC ACGATCCGGC GGTGGACTGT GGCTTCCCGG CAACGAGGTG CTGGACCGGG CCGACGTCAC CGACCGGATC GAGGACGCGC GCACCTACCT GGCACACGTT GCCGGACCGG ACTCCACCCC CGAGAAACAA CACGCATTCC TCACCGCCGC GTCGGACGTG GTGGCATTCG TCCGCGCACA CACCCCGCTC GACTTCGTCT GGGTGACCGA CTACCCGGAC TACTACCCCG AGGCACCGGG CGGACTCCCA GGCGGGCGCA GCATCGAGCC ACTGCCGCTG GATGCCCGGG TGGTAGGACC CGATCTGGCG ACGCTGGCCG CACCGTACCG GGCAGCGCCG AAGGGCATGG CGGTCACCCA GGTCGACTAC CGGTGGCTGT CGCTGGGCAC CCGGCATCCC CGGGCGATCC TCACCGCGGC CCGGCTCGCC GCTTATGGCC TCACCGCCCG GATCCGACGT CGGCACAGGC TCACCATGGG CCAGGCACTC GCCGCCGGGT TGCGCGCCGG CCTGCGCACC ATGGGCGTCC CGGTCCGACT CGGCACACCG ATGACCGACC TGCTCGTTGA ACAGGGCCGG GTCAGCGGAG TGCACGCCGC GCACGCCGGC GAACCAGTGC TGGTCCGTGC CCGGCAGGGC GTACTGTTGG CCAGCGGCGG ATTCGAGCAC AACGAATCGA TGCGCCGCAA GCACCAGGAT GGCATCGGCA CGGAGTGGAC CGCGGGTGCA GTCGGCAACA CGGGCGACGG CATCCGGGCG GGTGAGCGAC TGGGCGCCGC GCTCGACCTG ATGGACGAGG CATGGTGGGG GCCATCGATC CCACTCACCG GCGGACCGTA CTTCTGCCTC GCCGAACGTA ACCAGCCCGG TTGCCTGCTG GTCGACGCCA CCGGCCGGCG CTTCGTCAAC GAAGCGGCGC CCTACGTGGA CGCGGTGCAC GCGATGTTGC GCCCGGGTGT GCGCCTACCG GCCTGGTTGG TGGCCGACCA GACCTACCGG GACCGCTACC TCTTCGCCGG GCGCGCCCCA CGTTCCCCAC TACCGCGTCG TTGGTTCGCC TCGGGAGTCG CGCACCGCGC CGACACACTG GACGAGCTTG CTGCTCGGAT CGGAGTGCCG GCCGCCGCGC TTGCCAGCAC GGTACACCGG TTCAACCAGT TCGCCGCACG CGGTCAGGAC GACGACTTCC ACCGTGGTGA CTCGGTCTAC GACCGCTACT ACGGCGACCC ACGACATCGG CCCAACCCGT GTCTGGGTGC CGTCACCCGA CCACCGTTCT ACGCGTTCCG CATGGTGCCC GGTGACCTGG GCACCAAGGG CGGGCTGCGT ACCGACGAAC GGGCCCGGGT GCTGCGCCCG GACGGTACGG TCGTTCCCGC GCTGTACGCC GCGGGCAACG TCAGTGCCTC GGTGATGGGC CGCAGCTACG CCGGCGCCGG CGCGACCCTC GGCCCGGCTC TCACCTTCGG CTACCTGGCA GCACTCGACC TGGCCGCGAG TGCCGCCACC CCCACACTTG TTCGGGAGGA CTGA
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Protein sequence | MSKPGDNVDV VVVGSGGAGM VAALAAAHRG LSTVVLEKSE QYGGSTARSG GGLWLPGNEV LDRADVTDRI EDARTYLAHV AGPDSTPEKQ HAFLTAASDV VAFVRAHTPL DFVWVTDYPD YYPEAPGGLP GGRSIEPLPL DARVVGPDLA TLAAPYRAAP KGMAVTQVDY RWLSLGTRHP RAILTAARLA AYGLTARIRR RHRLTMGQAL AAGLRAGLRT MGVPVRLGTP MTDLLVEQGR VSGVHAAHAG EPVLVRARQG VLLASGGFEH NESMRRKHQD GIGTEWTAGA VGNTGDGIRA GERLGAALDL MDEAWWGPSI PLTGGPYFCL AERNQPGCLL VDATGRRFVN EAAPYVDAVH AMLRPGVRLP AWLVADQTYR DRYLFAGRAP RSPLPRRWFA SGVAHRADTL DELAARIGVP AAALASTVHR FNQFAARGQD DDFHRGDSVY DRYYGDPRHR PNPCLGAVTR PPFYAFRMVP GDLGTKGGLR TDERARVLRP DGTVVPALYA AGNVSASVMG RSYAGAGATL GPALTFGYLA ALDLAASAAT PTLVRED
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