| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2838 |
|---|
| Symbol | |
|---|
| ID | 5708012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 3222774 |
|---|
| End bp | 3224321 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641272294 |
|---|
| Product | long-chain-fatty-acid--CoA ligase |
|---|
| Protein accession | YP_001537664 |
|---|
| Protein GI | 159038411 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.153198 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGCA TCGGACTGTG GAACATCGCG AGTCAGGATC CAGACCAGGT CGCCATCGTG
GAGCCGGACG GCCGTACCGT CACCTACGGG GAGTTGGCCG CTGAGGCCGA CCGGATCGGG
CGCGGCTTCC AGTCGCTCGG CCTGGCGCCC GGGGACACCG TGGCGATGCT GCTGCCCAAC
GGCGCCGACC TGTTCGCCGC CGAGTTCGCG GCCCTGGAGA CGGGGTTGTA CTCGGTGCCG
TTGAACTGGC ACCTGACCGC TGCCGAGATC GCCTACATCC TGCGCGACAG TGGCGCCCGG
GCGTTCATCG CCCACGGACG GTTCGCGGAG GCCGCCGCTA CGGCCGCCGC CGAGGCCGGC
ATCCCGGCCG ACGGGTGTCT AGCGGCAGGT GAAGTTCCCG GGTTTCGGCC GCTCACCAGC
CTCGGTGCCG GTGGATCCGG ACGGCCCCCG GTGCGGACCC TCGGCGCGCT GATGGTCTAC
ACCTCCGGGA CGTCGGGGCG ACCCAAGGGT GTGCGTCGGC CGCTCACCGG TGCCGACCCG
GACACCGTTT CACCAGTCTT CCTCTGGTTC TTCGGGCTGT TCGGGCTCGC GCCGTTCGAC
TCCCATGTGC ACCTGTGTTG CTCGCCGGCC TACCACACCG CGGTGATGAA CTTCGTGGTT
GTCTCCCTCC AACTCGGGCA TCCCGTGGTG CTGATGGACC GGTGGGATCC GCACGAGATG
CTGCGGCTGA TCGAGCGTCA CCGGGTCACC CACAGCCACA TGGTGCCCAC CCAGTTCCGC
CGGCTGCTCG CCCTGCCGGA GAAGGTCCGG ACCGCGTACG ACCTGTCGTC GATGCGCGTG
ATGGTCCACG GTGCGGCGCC GTGCCCGCAG GAGGTCAAGC GTCGGATGCT CGACTGGTGG
GGGCCGGTCG TGGTGGAGTA CTACGCCGCC ACCGAGGGCG GAGGCACCCT GATCACCGCG
GTGGACTGGC TGGCCCGGCC CGGTTCGGTG GGGCAGGCCT GGCCGGGCAC ACGGGTGCGG
GTACTCGACC CGGACGGCAA CGACGCACCA GCGGGTCAGC CCGGGACGGT GTATCTGCAG
ATGGGCGAGT TGACCTTCGA ATACCATGGG GACGCTGAGA AGACCCGACA GGCCTGGCGG
GATCGGATGT TCACCGTGGG GGACGTCGGC TATCTCGATG ACGATGGCTA CCTCTACCTG
TGTGACCGCA AGAGCGACAT GATCATCACG GGTGGGGTGA ACGTCTATCC AGCCGAGATC
GAGGGCGAAC TCGCCGCTCA CCCGGCCGTC GCGGACGCCG CTGTCTTCGG TGTCCCGCAC
GACGAGTGGG GCGAGGAGAT CAAGGCAGTG GTGCAGCCGG AGCTCGGTGT GACCCCCGGC
CCGGAGCTGA CCAACGAGCT GCTTGCGTTC CTGGCCGGCC GGCTGGCCAG GTTCAAGCTG
CCACGCAGCG TCGACTACGT TGACGAGTTG CCCCGTGACC CGAACGGCAA GCTCTACAAG
CGACTGCTGC GCGACCCGTA CTGGGCCGCG CGGCAACGGG CCATCTAG
|
|---|
| Protein sequence | MTGIGLWNIA SQDPDQVAIV EPDGRTVTYG ELAAEADRIG RGFQSLGLAP GDTVAMLLPN
GADLFAAEFA ALETGLYSVP LNWHLTAAEI AYILRDSGAR AFIAHGRFAE AAATAAAEAG
IPADGCLAAG EVPGFRPLTS LGAGGSGRPP VRTLGALMVY TSGTSGRPKG VRRPLTGADP
DTVSPVFLWF FGLFGLAPFD SHVHLCCSPA YHTAVMNFVV VSLQLGHPVV LMDRWDPHEM
LRLIERHRVT HSHMVPTQFR RLLALPEKVR TAYDLSSMRV MVHGAAPCPQ EVKRRMLDWW
GPVVVEYYAA TEGGGTLITA VDWLARPGSV GQAWPGTRVR VLDPDGNDAP AGQPGTVYLQ
MGELTFEYHG DAEKTRQAWR DRMFTVGDVG YLDDDGYLYL CDRKSDMIIT GGVNVYPAEI
EGELAAHPAV ADAAVFGVPH DEWGEEIKAV VQPELGVTPG PELTNELLAF LAGRLARFKL
PRSVDYVDEL PRDPNGKLYK RLLRDPYWAA RQRAI
|
|---|
| |