Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2823 |
Symbol | |
ID | 5707901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 3207232 |
End bp | 3207852 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641272279 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001537649 |
Protein GI | 159038396 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.133482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0456725 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGTCGA GAACAAATAC CAGAAGTCCG AGTGTCGCCG GCAGCCTGAG CGACGCCGAG CAGGGGTCGG CGGCACAACG TGAGCGCAGG CGACGCATCC TGGACGCCAC CCTCGTCCTG GCATCCAAGG GCGGATACGA CGCGGTGCAG ATGCGCGCCG TCGCCGAGCA CGCAGATGTC GCACTCGGCA CGTTGTACCG CTACTTCCCC TCCAAGATCC ACCTTTTGGT GTCCGCCCTC GCCAGGGAGT TCGAGCGGAC GCAGGACAGG CTCCGCCGCA CCGCCATCCC GGGCGAGACG CCACACGAGA GAACCGTGTT CGTCCTCGGC CGGGTCACCC GCGCCATGCA GCGCGACCCC ATGCTGACCG AGGCGATGAC CCGGGCCTTC ATGTTCGCCG ACCCGACCGC CGCCGCCGAG GTCAATGTCG TCGCGCGACT GATGGAAGAC ATGTTCATCA TGGCCATGCG CGACGGCAAG CCGTCGGCGG ACGACCGGGC CAAAGCCCGC GTCATCGGCG ACGTCTGGCT GTCCAGCCTG GTCGCCTGGG TCACCAGGCG AGCCTCGGCC AACGACGTGC ACGAGCACCT CGAACTCGCC GCGCGCCTGC TGCTGCGTTG A
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Protein sequence | MASRTNTRSP SVAGSLSDAE QGSAAQRERR RRILDATLVL ASKGGYDAVQ MRAVAEHADV ALGTLYRYFP SKIHLLVSAL AREFERTQDR LRRTAIPGET PHERTVFVLG RVTRAMQRDP MLTEAMTRAF MFADPTAAAE VNVVARLMED MFIMAMRDGK PSADDRAKAR VIGDVWLSSL VAWVTRRASA NDVHEHLELA ARLLLR
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