| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2802 |
|---|
| Symbol | |
|---|
| ID | 5706158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 3181995 |
|---|
| End bp | 3183503 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641272258 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_001537628 |
|---|
| Protein GI | 159038375 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.163668 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000224903 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCTCT CGATCAAGTC ACGACGGGAC GGGGTGGGAC TGGGCCGGGG GCACCTGCTT
GTCGCGGGTG CGTGGCGACC GTCGCGCGAT GGTGGGACGT GGGTGCACCT GCACCCGGCG
ACGGGTGAGG AGGTGGGGGA GTTCGCGATC GCGGACCCCG CCGACGTCGA CGCTGCTGTC
CGGGCTGCCC GACAGGCGTT CGACGAAGGG CCCTGGCCCC GCAGCCGGGC GAGAGAACGC
ATCCGGGTCC TGCGACGCGC CGCAGACCTG ATCCGCGAGC ACTCCGACGA ACTGCTCGCG
CTCCAGGCGC TCGACAACAG CGTCCCGTTG AGCTTCAGCG GTGCCTACGT GATGTCGGCC
GAGTGCGCGG CCGACGTCTT CGACCACCAC GCGGGCTGGA TCGACAAGCT TGGTGGTGAG
ACGCTACCGC CCTACCAAGG GGGTGACCAC CTGGTATTCA CCCTGCGCGA GCCGATTGGG
GTGGTGGCGG CGGTCATTCC GTGGAACGCC CCGCTCTTGT TGGCGGCGCA GAAGCTCGCG
CCGGCGCTGG CCTCCGGGTG CACGGTCGTG CTGAAGCCGT CAGAGTACGC CACCTTCGCG
GTACTGCGGT TGGTGCAGAT TCTCGACGAG GCGGGAGTGC CACCGGGTGT GCTCAACGTG
GTGACCGGGC CCGGCGAATC GACCGGTGAG GCGTTGATCA CCCATCCGAT GGTAGACAAG
ATCACCTTCA CCGGCAGTCG TGCTGTGGGT CGCCGTATCC TGCACGCCGC AGCCGACGGA
ATCACCAAGG TGAGTCTGGA ACTCGGTGGG AAGAGCCCAT CGATCGTATT CGCAGACGCC
GATGTCTACG CGGCGGCGGC GATGACCATG GGCACCGTCA CCGTAGGACT GTCTGGTCAG
GTGTGTGTGG CCCACAGTCG GGCACTGGTC CAGCGCGAGG TTTACGACGA GTTCGTGTCG
ATCGCCACCG GGGCGACCGC GCTCGCGTGC TACGGGGATC CGTTCGACGC CGAGACCACC
GCCTCACCGC TGATCAACGG ACGACAGCTC GACCGGGTGC TCGGCTATGT CGCACAAGGC
CAGGCGGAGG GCGCTCGCCT GGTGTGCGGG GGCGAACGGG TTGGGGGAGA GCTGGCTGCG
GGCAACTTCG TGACCCCGGC GCTCTTCGCC GACGTGGCCA GCGACATGAC CATCGCCCGT
GAGGAGATTT TCGGTCCCGT GCTGGGTGTG ACTCCGTTCA CCGACGAGCA GGAGGCGATA
CGCCTGGCGA ACGACACCGA GTATGGACTC GCCGCCATGG TGTGGACCGC GGATGTGAAG
CGGGCCATGC GCCTGACCCG AGCCGTGCGG GCGGGAACCA TCGGCGTCAA CGGCTACCAG
GTGGAGCCAC ACGCGGCCTT CGGTGGATTC GGTCAGTCCG GGCTCGGACG CGAGGGCGGG
CGAGGCTCGG CAGAGGCTTT CACCGAGGTG AAGACCGTGC TGGTGCCGAC CACCGAGGAG
CTCATGTAG
|
|---|
| Protein sequence | MVLSIKSRRD GVGLGRGHLL VAGAWRPSRD GGTWVHLHPA TGEEVGEFAI ADPADVDAAV
RAARQAFDEG PWPRSRARER IRVLRRAADL IREHSDELLA LQALDNSVPL SFSGAYVMSA
ECAADVFDHH AGWIDKLGGE TLPPYQGGDH LVFTLREPIG VVAAVIPWNA PLLLAAQKLA
PALASGCTVV LKPSEYATFA VLRLVQILDE AGVPPGVLNV VTGPGESTGE ALITHPMVDK
ITFTGSRAVG RRILHAAADG ITKVSLELGG KSPSIVFADA DVYAAAAMTM GTVTVGLSGQ
VCVAHSRALV QREVYDEFVS IATGATALAC YGDPFDAETT ASPLINGRQL DRVLGYVAQG
QAEGARLVCG GERVGGELAA GNFVTPALFA DVASDMTIAR EEIFGPVLGV TPFTDEQEAI
RLANDTEYGL AAMVWTADVK RAMRLTRAVR AGTIGVNGYQ VEPHAAFGGF GQSGLGREGG
RGSAEAFTEV KTVLVPTTEE LM
|
|---|
| |