Gene Sare_2800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2800 
Symbol 
ID5706156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand+ 
Start bp3180047 
End bp3180721 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content69% 
IMG OID641272256 
ProductTetR family transcriptional regulator 
Protein accessionYP_001537626 
Protein GI159038373 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.697977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones4 
Fosmid unclonability p-value0.000162176 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGACCACGA AGAAAGCCAG CAACGCGAGC CTGCCATCGG AGCGTCGTGC CCGCCTCGTG 
CGCCTCGCCG GGGAGCTGTT CGCCGAGAAG GGCTTCCGCG CCACCACCGT GCGCGAGATC 
GCCGACGCGG CCGGCATCCT CTCCGGCAGC CTGTACCACC ACTTCGACTC CAAGGAGTCG 
ATCGGTGACG AGATCCTGTC TGGCTTCCTC GACGAGGTGC TCACCGGATA CCGCGAGGCG 
GCCGCCGGCA CCGACGACCC CCGCACCACG ATCGAGCAGT TCGTTCGCTC CAGCGCCGCG 
ACGTTGGCCC GACACCGCGC CGCCCTCACC ATGCTGCAGA ACGACTGGAG CCACTTCCGT 
GCCATGCCGC GCTTCGACTA CCTGCGCACC GCCACCCGCG AGATCGAGCA CCTCTGGGTC 
GACCAGCTGG AGCGGGGAAA ACAGAGCGGG CTGTTCCGCC CCGACCTGGA CGCCAGACTG 
ACCTACCGGC TGCTGCGGGA CGTGTTGTGG ATACCGACGC GTTGGGGGCA GAGCAGTAGC 
AACGGCTGGG ACACCGACCA GATCGCCGAC GCGGTCCTGC GCCTGATCTT CGATGGCATC 
GTGGCCCGAG ACAGCAGGCC GGCCGGCACA TCTCCGGCGG ATCGCCAGGG CCGGGCGAGG 
CCAGCGAGAA GCTGA
 
Protein sequence
MTTKKASNAS LPSERRARLV RLAGELFAEK GFRATTVREI ADAAGILSGS LYHHFDSKES 
IGDEILSGFL DEVLTGYREA AAGTDDPRTT IEQFVRSSAA TLARHRAALT MLQNDWSHFR 
AMPRFDYLRT ATREIEHLWV DQLERGKQSG LFRPDLDARL TYRLLRDVLW IPTRWGQSSS 
NGWDTDQIAD AVLRLIFDGI VARDSRPAGT SPADRQGRAR PARS