Gene Sare_2796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2796 
Symbol 
ID5706152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3176655 
End bp3177218 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content66% 
IMG OID641272252 
ProductPadR-like family transcriptional regulator 
Protein accessionYP_001537622 
Protein GI159038369 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000783217 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCACTGC GGCACGCGGT GCTGGCGGCG CTGCTCGACG GCGAGTACAG CGGCTATCAG 
TTGGCCAAGA TCTTCGATGT GTCGCTTTCC AACATCTGGT ATGCGGTGCC CCAGCAGCTC
TACGCCGAAC TGACCAAGCT GGAGCAGGCT GGCTTGATCA CCGGCCGTCA GGTCATCCAG
CACGACCGAC CCAACAAGCG GCTGTTCACG GTCACCCCCG CCGGCCTCGC GGAGCTGGCC
GCGTTCGCTG CCGCACCATC CAAACCGTCA TCCATCCGGG AGGACCTGCT TGTCATGGTC
CAGGCCGTGG ACCGGCTGGA CCCAGCCCCG GTCATCGCCC AGCTCGAGGA ACGCGCGGTA
ATGGCCACGG CCAAGGTGGA ACTCTTCGAC CAGACGCTCA GGCAGTTGCG CGGTGACCTG
ACCGAGGAGA CCTTTCTGCG CGAGAGCGAT CGGATCGGGC CCTACCTCAC CTGCCTGCGT
GGCCGTCGGT TCGAGCAGGA GAATCGCGAG TGGTGCGAGC AGGTGGTGGC CCTGCTGCGG
GCCCGGGTGC CGCTGTCGGA CTGA
 
Protein sequence
MALRHAVLAA LLDGEYSGYQ LAKIFDVSLS NIWYAVPQQL YAELTKLEQA GLITGRQVIQ 
HDRPNKRLFT VTPAGLAELA AFAAAPSKPS SIREDLLVMV QAVDRLDPAP VIAQLEERAV
MATAKVELFD QTLRQLRGDL TEETFLRESD RIGPYLTCLR GRRFEQENRE WCEQVVALLR
ARVPLSD