Gene Sare_2789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2789 
Symbol 
ID5707868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3170420 
End bp3171013 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content74% 
IMG OID641272245 
Productcopper resistance protein CopC 
Protein accessionYP_001537615 
Protein GI159038362 
COG category[R] General function prediction only 
COG ID[COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0441468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000669635 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGGACCA ACACCCGCTC GACACGCGCC GGCTTCCTCG CCGCCGCCCT GGCCGCCGCG 
CTGCTGCTCG TGCCGGCTGC CCCAGCCGCC GCGCACAACT CCCTGAAGGC CGCCACACCA
GCCAAGAACG CCCAGCTGGC CACGGCACCG ACCGAGATCA CACTGGAGTT CCTGCAGAAA
CTCGACCCGG CGTTCACCAC CATCGTCCTC TCCGACGCCG CGCAGCAGAA GATCCCGACC
GGGGAGCCCA TGGTCACCGG GGCGACGGGC ACCATAAGCA TCGACGGCCC ACTGCCGAAC
GGCACCTACA CCGTTGCGTA CCGGGTGGTC TCCGCCGACG GGCACCCGGT CCAGGGCTCG
TACCCGTTCA CGGTCGCCGA CCCCGCCGGC GCCGAGGCAC CGCCGCCGGT GTCCCCCGCG
GCCGAGCCCG ACCCAACGGC GACGGACGCC ACCTCGGCGA GCCCGGCGTC CGCCACCGGC
GGCGACAACG ACGGCGGCGG TCCCGGCGCG CTGGCGGTGG TCGGTGTCGG GATCGTGCTG
GTGCTGGTGG CCGGGACTGC GGTGCTACTG CGCCGCCGAC GCGGCAACGC CTGA
 
Protein sequence
MRTNTRSTRA GFLAAALAAA LLLVPAAPAA AHNSLKAATP AKNAQLATAP TEITLEFLQK 
LDPAFTTIVL SDAAQQKIPT GEPMVTGATG TISIDGPLPN GTYTVAYRVV SADGHPVQGS
YPFTVADPAG AEAPPPVSPA AEPDPTATDA TSASPASATG GDNDGGGPGA LAVVGVGIVL
VLVAGTAVLL RRRRGNA