Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2780 |
Symbol | |
ID | 5706172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3161663 |
End bp | 3162541 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641272236 |
Product | hypothetical protein |
Protein accession | YP_001537606 |
Protein GI | 159038353 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.2366 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000681524 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCATTA GTCGAGTCCG CTGGTCGGCG GCCTCCGTGT TGCTGCTCCT GCTCGCCACC GCCTGCGCCC CGCAGGGCGG GGATGACAAC GCAGACGTTT CCGGCCAGCC GGAGGTTTCT CACCCCGCCG ACGCGGTGGT GTTCCGGATG ACGTCCGTCG GCGGGTTCGG GATGCCGTCG ACGCTGGCCT CCTACATCCC GTCCATCAGC GTCTACGGCG ACGGACGAGT GATCAGCCAG GGTCCGACGA CCCTGATCTA TCCCGGCCCG GCGCTGCCCA ATCTCCAGGT GCACACGATC GACACGGTGG AGGTGGCGAA GCTGCTGGAG TCGGCGCGGA CGGCCGGCGT GAACGGCACG GTGGACTTCG GCACCCCGAC GATCGCCGAC GCGACGTCGA CCCGGTTCAC GGTACGTGGG GCGAACGGAG TCGAGCAGAT CGAGGTCTTT GCCCTCGCCG AGGCGAGCGA CGGCGTGGGG GGCCTGACCG CCGACCAGCG GGCGGCCCGG TCCCGGCTGC GGGCGTTCGT CGAGTCGCTC ACCAGCGAGT CGGGGCCGCT GGCCCCGGCA CCGGACGGCG GCGCGCAGTC CTACGCGCCT ACCGTGGTCG CCGCCGTCAC GGAACCGTAC GGCGACCAGG GCGGTGACCA GCCCGAGATG GCCTGGCGCG GGCCGACGTT GCCTGGCGAG AAACTTGGTG GCGGCAACGG GCCGGGCTGC GTGACGGTCA CCGGGGACGC GCTGCGGACG CTGCTCGCGG ACGCGGCGGA CGCCACCGCG GCGACGCCGT GGATCTCGGA CGGTAAACGG TGGATGGTGC GGCTGCGGCC GTTGCTGCCG GACGAGTCGG CCTGTGGGGA CCTCGTGGCC GACGACTGA
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Protein sequence | MTISRVRWSA ASVLLLLLAT ACAPQGGDDN ADVSGQPEVS HPADAVVFRM TSVGGFGMPS TLASYIPSIS VYGDGRVISQ GPTTLIYPGP ALPNLQVHTI DTVEVAKLLE SARTAGVNGT VDFGTPTIAD ATSTRFTVRG ANGVEQIEVF ALAEASDGVG GLTADQRAAR SRLRAFVESL TSESGPLAPA PDGGAQSYAP TVVAAVTEPY GDQGGDQPEM AWRGPTLPGE KLGGGNGPGC VTVTGDALRT LLADAADATA ATPWISDGKR WMVRLRPLLP DESACGDLVA DD
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