| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2769 |
|---|
| Symbol | |
|---|
| ID | 5706698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 3150963 |
|---|
| End bp | 3151499 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641272225 |
|---|
| Product | anti-sigma-factor antagonist |
|---|
| Protein accession | YP_001537595 |
|---|
| Protein GI | 159038342 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0370264 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000540965 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCC TACCGGACGA CAACATGATG ACCCTGATCT GCGATGGTTG CGGGGAGACC
GCCGCCAGCA CAGCTGTTGT CCTACCCGAC GAGGAAGTGG TCTGGACACT CGTGTCCGAG
CATGGTTGGA GCGGATCCCC GTTCGCGACC GGCCCGCATC GGTGCCCCCG GTGCGTCCCG
TCCCCGCCGG GAGCCGACCG ACCCATCGCC GCCCAGCCGT CCGCCGTCAA CGACCACGAC
GAGGTCGTCG ACGAGAGCGC GGCGGCGGTG GACCCGTTGC GCACCGCGCT GACCGAGGCC
ACGGAGCACG AAGGGCGGGT GGTCGTTGAC CTCTCCGCCG TCGAGCAAAT CGACTCCGTC
GGTCTGGGTC TGCTCGTCCG CGCCCGGCAG GAGGCCCGCC AGCGCGGCGC GGAGCTGTGC
CTCCACGCGC CCTCCCGGTT CGTGTTGACC GTGCTGCACA CGATGCGCCT GGACACCGCG
TTCCCCATCG TCACCGCCGG ACCCGACGCG GCAGACCAGC CCAAGGTGCT GGTGTGA
|
|---|
| Protein sequence | MTVLPDDNMM TLICDGCGET AASTAVVLPD EEVVWTLVSE HGWSGSPFAT GPHRCPRCVP
SPPGADRPIA AQPSAVNDHD EVVDESAAAV DPLRTALTEA TEHEGRVVVD LSAVEQIDSV
GLGLLVRARQ EARQRGAELC LHAPSRFVLT VLHTMRLDTA FPIVTAGPDA ADQPKVLV
|
|---|
| |