| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2766 |
|---|
| Symbol | |
|---|
| ID | 5706695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 3149357 |
|---|
| End bp | 3150031 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641272222 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001537592 |
|---|
| Protein GI | 159038339 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.327413 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000587872 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGG TACTGGTGAT CGAGGACGAC GACCGGATCC GGTTGGCGCT GCTGCTCGCG
CTCGAGGAGG AGGGCTACAC CGCGCGGGGC GCGGCGACCG CCGAAGAGGG GCTGCGGATG
CAGCGTTCCG ATCCGGCCGA CAACGTGTTG TTTGACCTTA TGCTGCCGGG CATCGATGGC
TTCGAGGGCA TCCGCCAGCT ACGTCGCGAC GATGACGTCC CGATCGTGGT CGTCAGTGCC
CGCGACGACA CCCACGACAT CGTCGCCGCG CTGGAGGCCG GCGCCGACGA CTACGTGGTC
AAACCAATCG CGATCAAGGA GTTGTCCGCG CGGTTGCGGG CCCTGCGTCG TCGAGCTCGG
GCGGTGGTCG CCCCGGTCGC GGTGCAGGTC GTCGGTGACC TGGAGATCAG CCCAGACGCG
GGGGAGGTGC GCCGTGGTGG GCATCCGGTG CCGCTGACCC GCACCGAGTT CCGGCTGCTC
TGCGAGCTGG CCGAGCACGC CGGTCGGGTG CTGTCCCGGC AGCAGTTGTT GCAGCGGGTC
TGGGGATACG ACAGCGGCGA CGAGCGCTTG GTCGACGTGC ACGTCGGGCG GCTGCGCCAG
AAGATTGAGG CGGAGCCGGG TAATCCGCGA CACCTGGTCA CGCTGCGGGG CCTCGGCTAC
AAGCTCCAGC GATGA
|
|---|
| Protein sequence | MTAVLVIEDD DRIRLALLLA LEEEGYTARG AATAEEGLRM QRSDPADNVL FDLMLPGIDG
FEGIRQLRRD DDVPIVVVSA RDDTHDIVAA LEAGADDYVV KPIAIKELSA RLRALRRRAR
AVVAPVAVQV VGDLEISPDA GEVRRGGHPV PLTRTEFRLL CELAEHAGRV LSRQQLLQRV
WGYDSGDERL VDVHVGRLRQ KIEAEPGNPR HLVTLRGLGY KLQR
|
|---|
| |