Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2742 |
Symbol | |
ID | 5705725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 3123404 |
End bp | 3124504 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641272198 |
Product | transport system permease protein |
Protein accession | YP_001537568 |
Protein GI | 159038315 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00162968 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0118957 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTGTCAA GTCCGGCCCC GGCGTTTCGC ACCACTTCGG AGTTCACACT GTCCGTCACC CATCCACCGC CGTCCGCTGT CCGAGCGGTT CCGGCGCACC CCATCCCGCG CGGTCGCCCC GCCACCCGCG CCACCGGCCT CGCCGCCGCC GTGGTCCTGC TCGCCGCCAT CGTGGTGCTC AGCATCGCCG TCGGAGCGAA GGCACTTCCC CTCGCCGACG TCTGGCCCGG CCTGCTCGAC CCCGCTGCGG ACGAATACAC CGTCGTCCAC CAGATGCGGC TGCCGCGCAC GCTGCTCGGC CTGCTCGCCG GGGCCGCCCT CGGCGTGGCC GGCGCGATCA TGCAGGCCCT CACCCGTAAC CCGCTCGCCG ACCCGGGACT ACTCGGCATC AACGCCGGCG CCTCGGCCGC GGTGGTCACC GGCACGGCCG TCGCCGGTGT CGCGGGTCTG CACGGACAGG TCTGGTTCGC GCTGATCGGT GCTGCCGCCG TCACCGCCGC CGGATACGTC GTCGGCGGTG GACGCGGCGC CACCCCCGCG CGACTGGCGC TCGCCGGCGC CGCGATCAAC GCCACCCTCT ACTCGTACGT GAGCGCGGTC ATGCTGCTCG ACACCGCCTC GCTGGAACGG TTGCGGTTCT GGACGGTGGG GTCGCTGGCC ACCGCCGAGC TGACCATCGT CGGCACGGTG GCGCCGTTCA TCGCGGCAGG GCTGCTGCTC GCGCTCGCCG TGGCCCGCCC GCTGAACGCC CTCGCCCTCG GCGACGACAC CGCGCGGGCG TTGGGCGCGC GGCCGGCGCT GATCCGGGGC GCGGTCATCG CGGCGGTCAC CCTGCTCTGC GGCACCGCCA CCGCCGCCTG CGGACCGATC ATTTTCGTCG GGCTGCTGAT TCCACACCTG GTACGTGCGC TGACCGGGCC GGACCTCCGT TGGCTGCTGC CCTACTGCGC CGTGCTCGCA CCAGTGCTCC TGCTCGGCGC CGACGTGCTC GGCCGGGTGC TCAGTCGCCC CGGCGAACTC CAGGTCGGCA TGGTCACCTC CGTGCTGGGT GGGCCGCTCT TTCTCTGGCT GGTGCTACGT GGACGGGTGG GGCGGCCATG A
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Protein sequence | MLSSPAPAFR TTSEFTLSVT HPPPSAVRAV PAHPIPRGRP ATRATGLAAA VVLLAAIVVL SIAVGAKALP LADVWPGLLD PAADEYTVVH QMRLPRTLLG LLAGAALGVA GAIMQALTRN PLADPGLLGI NAGASAAVVT GTAVAGVAGL HGQVWFALIG AAAVTAAGYV VGGGRGATPA RLALAGAAIN ATLYSYVSAV MLLDTASLER LRFWTVGSLA TAELTIVGTV APFIAAGLLL ALAVARPLNA LALGDDTARA LGARPALIRG AVIAAVTLLC GTATAACGPI IFVGLLIPHL VRALTGPDLR WLLPYCAVLA PVLLLGADVL GRVLSRPGEL QVGMVTSVLG GPLFLWLVLR GRVGRP
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