Gene Sare_2740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2740 
Symbol 
ID5705723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3120582 
End bp3122174 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content73% 
IMG OID641272196 
Productpyridoxal-dependent decarboxylase 
Protein accessionYP_001537566 
Protein GI159038313 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0076] Glutamate decarboxylase and related PLP-dependent proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.14205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0399621 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGC CCGCAGACCC CGTGCCGCTC GACGGAAAGC CCACCCCAGC CCGCCCCGAC 
GCCCTGTCCA CCTCGGTGGG AACCGTTGCC GCCGCCCAGG CGTACCTGCT CGCCGACGGC
TCGGTCGACC GCTACCGACA GGTGCTCGCC GACGGGGTGG ACCGGGTGGC CCGTCGGGTC
GCCGCGGTCG ACCGGCCCTT CACCGGGATC GCCCCGGACG AACTGGCCCC GCTCGTCGGT
GACATCGAGC TCGACCGGCC ACTCGGCGAC CACGGTACTG CCCTGGACGA GTTGGACGAG
GTGTGGCTAC GCGACGCGGT CTGGTTCCAC CACCCCCGTT CCCTGGCCCA CCTCAACTGT
CCGGTGGCCA TCCCCGCGCT GCTCGGCGAG GCGATGCTCA CCGCGGTCAA CCCGTCGCTG
GACACCTGGG ACCAGAGCGC CGGCGCCACC TTCATCGAAC GCCGGCTGAT CGGGTGGACG
GCCACCCGCG TCGGGCTCGG TCCGAGCGCC GACGGGGTCT TCACCAGCGG TGGAACCCAG
TCCAACCTGC ACGCCCTGCT GCTGGCCCGG GAAGAGGCCG TGGCCCAGGT CACCGACGCC
GACGCCCGCG CCGTGCTGCT GTCCCGGCTG CGGATCCTCA CCTCCACCGC CGGGCACTTC
AGCGTGCAGA AGGCCGCGAA ACTGCTCGGA CTCGCGCCGG ACGCGGTGGT CACCGTCGAG
ACCGACGCGG CGCGGCGGAT GTGCCCGCAG GCGCTGGGCC GGGAACTGGA CCGCTGCCGC
CGCGCCGACC TGCCGGTGAT GGCGGTGGTC GCCACCGCCG GCACCACCGA CTTCGGCACC
ATCGACCCGT TGCCGGAGAT CGCCCGGCGC TGCGCCGCAG CGGGAGTCTG GCTGCACGTC
GACGCGGCGT ACGGCTGCGG CCTGCTGGTC TCGCCGACCC GCCGGCACCT GCTGGACGGC
ATCGAGCAAG CCGACTCGGT GACCGTCGAC TACCACAAGT CCTTCTTCCA GCCGGTGAGC
TCCAGCGCGA TACTGGTCCG GGACCGCCGG GTACTGCGCC ACGCCACCTA CCACGCCGAC
TACCTGAACC CGGCCCGGGC CGCCGCCGAG CGCATCCCGA ACCAGGTGGA CAAGAGTCTG
CAGACCACGC GCCGGTTCGA CGCGCTGAAG CTGTGGTTGA CCCTGCGGGT GATGGGCCCG
GACGCCATCG GCGCACTCTT CGACGAGGTC TGTGAACGGG CCGACGATGC CTGGGCTCTC
GCCGACACCG ACCCCCGCTT CGAGGTGGTC GCCCGCTCGC CGCTGAGCAC CGTCGTCTTC
CGCTGGTGCC CCACCGGCAT CGCGCCGGAA CTGGCCGACG AGGCCAACCG GCACGCCCGG
AACCAGCTCA CCGCCTCCGG GGCCGCCATG GTGGCCGGCA CCACGGTCGA CGGCCGGGCG
CACCTCAAGT TCACCCTGCT CAACCCCGCG ACCACGAGTG CGGACGTGAC CCTCGTGCTG
GACCTGATCG CCGAACACGC CGGCCGGTAC GCGCACGACC GCCCCCTCGG GCGGACCGAT
CGCGCCGCCG ACATGTCCTG CTCGGTTGTC TGA
 
Protein sequence
MTLPADPVPL DGKPTPARPD ALSTSVGTVA AAQAYLLADG SVDRYRQVLA DGVDRVARRV 
AAVDRPFTGI APDELAPLVG DIELDRPLGD HGTALDELDE VWLRDAVWFH HPRSLAHLNC
PVAIPALLGE AMLTAVNPSL DTWDQSAGAT FIERRLIGWT ATRVGLGPSA DGVFTSGGTQ
SNLHALLLAR EEAVAQVTDA DARAVLLSRL RILTSTAGHF SVQKAAKLLG LAPDAVVTVE
TDAARRMCPQ ALGRELDRCR RADLPVMAVV ATAGTTDFGT IDPLPEIARR CAAAGVWLHV
DAAYGCGLLV SPTRRHLLDG IEQADSVTVD YHKSFFQPVS SSAILVRDRR VLRHATYHAD
YLNPARAAAE RIPNQVDKSL QTTRRFDALK LWLTLRVMGP DAIGALFDEV CERADDAWAL
ADTDPRFEVV ARSPLSTVVF RWCPTGIAPE LADEANRHAR NQLTASGAAM VAGTTVDGRA
HLKFTLLNPA TTSADVTLVL DLIAEHAGRY AHDRPLGRTD RAADMSCSVV