Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2740 |
Symbol | |
ID | 5705723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3120582 |
End bp | 3122174 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641272196 |
Product | pyridoxal-dependent decarboxylase |
Protein accession | YP_001537566 |
Protein GI | 159038313 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.14205 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0399621 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTGC CCGCAGACCC CGTGCCGCTC GACGGAAAGC CCACCCCAGC CCGCCCCGAC GCCCTGTCCA CCTCGGTGGG AACCGTTGCC GCCGCCCAGG CGTACCTGCT CGCCGACGGC TCGGTCGACC GCTACCGACA GGTGCTCGCC GACGGGGTGG ACCGGGTGGC CCGTCGGGTC GCCGCGGTCG ACCGGCCCTT CACCGGGATC GCCCCGGACG AACTGGCCCC GCTCGTCGGT GACATCGAGC TCGACCGGCC ACTCGGCGAC CACGGTACTG CCCTGGACGA GTTGGACGAG GTGTGGCTAC GCGACGCGGT CTGGTTCCAC CACCCCCGTT CCCTGGCCCA CCTCAACTGT CCGGTGGCCA TCCCCGCGCT GCTCGGCGAG GCGATGCTCA CCGCGGTCAA CCCGTCGCTG GACACCTGGG ACCAGAGCGC CGGCGCCACC TTCATCGAAC GCCGGCTGAT CGGGTGGACG GCCACCCGCG TCGGGCTCGG TCCGAGCGCC GACGGGGTCT TCACCAGCGG TGGAACCCAG TCCAACCTGC ACGCCCTGCT GCTGGCCCGG GAAGAGGCCG TGGCCCAGGT CACCGACGCC GACGCCCGCG CCGTGCTGCT GTCCCGGCTG CGGATCCTCA CCTCCACCGC CGGGCACTTC AGCGTGCAGA AGGCCGCGAA ACTGCTCGGA CTCGCGCCGG ACGCGGTGGT CACCGTCGAG ACCGACGCGG CGCGGCGGAT GTGCCCGCAG GCGCTGGGCC GGGAACTGGA CCGCTGCCGC CGCGCCGACC TGCCGGTGAT GGCGGTGGTC GCCACCGCCG GCACCACCGA CTTCGGCACC ATCGACCCGT TGCCGGAGAT CGCCCGGCGC TGCGCCGCAG CGGGAGTCTG GCTGCACGTC GACGCGGCGT ACGGCTGCGG CCTGCTGGTC TCGCCGACCC GCCGGCACCT GCTGGACGGC ATCGAGCAAG CCGACTCGGT GACCGTCGAC TACCACAAGT CCTTCTTCCA GCCGGTGAGC TCCAGCGCGA TACTGGTCCG GGACCGCCGG GTACTGCGCC ACGCCACCTA CCACGCCGAC TACCTGAACC CGGCCCGGGC CGCCGCCGAG CGCATCCCGA ACCAGGTGGA CAAGAGTCTG CAGACCACGC GCCGGTTCGA CGCGCTGAAG CTGTGGTTGA CCCTGCGGGT GATGGGCCCG GACGCCATCG GCGCACTCTT CGACGAGGTC TGTGAACGGG CCGACGATGC CTGGGCTCTC GCCGACACCG ACCCCCGCTT CGAGGTGGTC GCCCGCTCGC CGCTGAGCAC CGTCGTCTTC CGCTGGTGCC CCACCGGCAT CGCGCCGGAA CTGGCCGACG AGGCCAACCG GCACGCCCGG AACCAGCTCA CCGCCTCCGG GGCCGCCATG GTGGCCGGCA CCACGGTCGA CGGCCGGGCG CACCTCAAGT TCACCCTGCT CAACCCCGCG ACCACGAGTG CGGACGTGAC CCTCGTGCTG GACCTGATCG CCGAACACGC CGGCCGGTAC GCGCACGACC GCCCCCTCGG GCGGACCGAT CGCGCCGCCG ACATGTCCTG CTCGGTTGTC TGA
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Protein sequence | MTLPADPVPL DGKPTPARPD ALSTSVGTVA AAQAYLLADG SVDRYRQVLA DGVDRVARRV AAVDRPFTGI APDELAPLVG DIELDRPLGD HGTALDELDE VWLRDAVWFH HPRSLAHLNC PVAIPALLGE AMLTAVNPSL DTWDQSAGAT FIERRLIGWT ATRVGLGPSA DGVFTSGGTQ SNLHALLLAR EEAVAQVTDA DARAVLLSRL RILTSTAGHF SVQKAAKLLG LAPDAVVTVE TDAARRMCPQ ALGRELDRCR RADLPVMAVV ATAGTTDFGT IDPLPEIARR CAAAGVWLHV DAAYGCGLLV SPTRRHLLDG IEQADSVTVD YHKSFFQPVS SSAILVRDRR VLRHATYHAD YLNPARAAAE RIPNQVDKSL QTTRRFDALK LWLTLRVMGP DAIGALFDEV CERADDAWAL ADTDPRFEVV ARSPLSTVVF RWCPTGIAPE LADEANRHAR NQLTASGAAM VAGTTVDGRA HLKFTLLNPA TTSADVTLVL DLIAEHAGRY AHDRPLGRTD RAADMSCSVV
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