Gene Sare_2734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2734 
Symbol 
ID5704475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3114435 
End bp3115499 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content75% 
IMG OID641272190 
ProductABC transporter related 
Protein accessionYP_001537560 
Protein GI159038307 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.188304 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAT ACCTGCTGGA CGCGCACCTC GCGGTGGACC GGGGAGACTT CCGGCTGGAC 
GTGCCCCTGC GGGTCGCGGC CGGTGAGGTG GTGGCGCTGC TCGGTCCGAA CGGTGCCGGC
AAGACGACCG CGCTGCGGGC GCTCGCCGGC CTGCAACGAC TGACCGCCGG CCACATCACG
GTGGCGGGCA GCGACCTGGA CCGGCCGGAT CGGCACACGT TCGTCCCCGC CGAGCGGCGG
TCGGTCGGCG TGGTCTTCCA GGACTATCTG CTCTTCCCAC ACCTGGACGC GCTCGAGAAC
GTGGCCTTCG GCCCACGCCG GCACGGTGCC GACCGACGGA CGGCTCGGCT GACGGCCGGC
GACTGGCTGG CCCGGGTGGG ACTGGTCGAA CACGCCCACC GGCGACCCGG GCAGCTCTCC
GGCGGACAGG CGCAACGGGT GGCACTGGCC CGGGCGCTCG CGGTGCAGCC GGCGGTGCTG
CTGCTCGACG AGCCGCTCGC CGCCCTGGAC GCGCGTACCC GCCTGGACAC CCGCGCCGAG
CTGCACCGGC ATCTCGACGC CCACCCCGGT GCCACCGTGC TGGTCACGCA CGACCCCCTC
GACGCGCTGG TGCTGGCCGA CCGCCTGGTG ATCGTGGAGG ACGGTCGGGT CGTCCAGGAG
GGCGACGCGG CCACGGTCAC CGCCCGGCCC CGCACCGACT ACGTCGCCCA GCTGGTCGGG
CTCAACCTGC ACCGGGGTCG AGCCGAGAAC AACCGGGTCC GGGTCGCCGA CGGGCTCCTG
CTCACCGTCA CCGATCGCCT CGATGGTGAC GCCTTCGTCG CGTTCCGGCC CTCGGCGGTG
GCGCTGCACC CCGGTCGGCC GGTCGGTAGC CCGCCCAACA CCTGGCCGGC CACGGTCGCC
GGGGTGCAGC GGCACGGTGA CAACCTGCGG GTGCAGTTGG ATGGGCCGAT CCGGGTGGCG
GCCGACGTGC CGCCCACAGC CGCGGCGACG CTGCGCCTGG TTCCCGGCCA ACCAGTGTGG
GCAGCGGTCG GGGTGGCGGA GACGCGCGCT TACCCGACGG GGTGA
 
Protein sequence
MTEYLLDAHL AVDRGDFRLD VPLRVAAGEV VALLGPNGAG KTTALRALAG LQRLTAGHIT 
VAGSDLDRPD RHTFVPAERR SVGVVFQDYL LFPHLDALEN VAFGPRRHGA DRRTARLTAG
DWLARVGLVE HAHRRPGQLS GGQAQRVALA RALAVQPAVL LLDEPLAALD ARTRLDTRAE
LHRHLDAHPG ATVLVTHDPL DALVLADRLV IVEDGRVVQE GDAATVTARP RTDYVAQLVG
LNLHRGRAEN NRVRVADGLL LTVTDRLDGD AFVAFRPSAV ALHPGRPVGS PPNTWPATVA
GVQRHGDNLR VQLDGPIRVA ADVPPTAAAT LRLVPGQPVW AAVGVAETRA YPTG