Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2696 |
Symbol | |
ID | 5708370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3070827 |
End bp | 3071309 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641272154 |
Product | phenylacetic acid degradation protein PaaD |
Protein accession | YP_001537524 |
Protein GI | 159038271 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 [TIGR02286] phenylacetic acid degradation protein PaaD |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.165626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00035972 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCCAGC CGGAGCCGAC CGAACCGGCC GCGGCGGGGC CAGTCGTCTC GAACGCGTCT GGTCAGCCTG GGGCGACGGA TGCTCAGCGG CGCAACGCCG CCTATGACAT GTTCGCCGCT GATGTCGCCT CACGTGCGCT CGGCATCGAG CTGATCGAGG CCGCGGACGG TGCGGCGATG GCCCGGATGC GAGTGACCGC GGCGATGGTC AACGGTCACC GTATCGCCCA CGGTGGCTAC CTGTTCCTGC TCGCCGACAC CGCGTTCGCG TTGGCCTGTA ACAGCCACGG CCCGGTGACG GTCGCGGCCG GCGGCGACAT TCTCTTCGTC CGGCCGGCGT ACGAGGGGGA TGTGCTGTTC GCCCGGGCTG TCGAGCGCGT CCGGTACGGG CGCAGCGGGA TCTACGACGT CACCGTCACC CGGGACGGCG GTGCCGTGAT CGCCGAGTTC CGTGGCCGGA GCCGTACCCT GAACGGGGCC TGA
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Protein sequence | MPQPEPTEPA AAGPVVSNAS GQPGATDAQR RNAAYDMFAA DVASRALGIE LIEAADGAAM ARMRVTAAMV NGHRIAHGGY LFLLADTAFA LACNSHGPVT VAAGGDILFV RPAYEGDVLF ARAVERVRYG RSGIYDVTVT RDGGAVIAEF RGRSRTLNGA
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