Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2695 |
Symbol | |
ID | 5708369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3069107 |
End bp | 3070558 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641272153 |
Product | polymorphic membrane protein |
Protein accession | YP_001537523 |
Protein GI | 159038270 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0661586 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000503026 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCACGT ATCAGGACAG CCAGCGACCG TCGTGGGGCC GGCGACGGCC CGGACGGCTG CTCGCCGGCG GGCTGGTGGC CAGCGGCCTG GTCGTCGGAG CGACGGGGCT GGTCGGCGTT GCCGGCGCGG CCGCGGCCCA CCACGACCGG CCATCCGCCA GCGAGAACGC GTACGCGGCT GGGGACGACT CCGCCCGCGA CCGCGGCTGG GAACGCAGGG CGGCGCCGGT ACCCTGTGAC AGCGCCAAGC TGATCGCCGC GCTGGTCCGG GTCAACGCCG AGGGCGGCGG GGCGCTGCGG CTCGCGCCGA GGTGCACCTA CACGCTCACC GATGCTTTCC ACCAGCCCGA CGCCTACGAC GGCGGGATCC GTGACGCGCG GGAAGCGGCG GACGCGGCCG AAAACCCCGG CCAGGCCGAG AAACCGCCCC GCAACCCGGC CGACGACAAG GCGGGGTTGC CGGTCATCTA CCACCCGGTG ATCATCGAGG GTGAGCACGC CACGATCGAG CGTCGTCGCG ATGCTGAGGA CTTCCGCTTC TTCACCGTCC GCGACGCTGG TGAACTGACG CTGCGTAACG TCACGCTCGT CGGCGGTCGC TCCGCCGCCG AGGGTGGTGC CGTCCACGTG GTGCACGGCG CATCGGCCGT GATCGAGCGG GTCACGGCGC TGCACAACAC CTCGTACTCG GCGGAGGGTG GCGGCGGTGC GCTGTTCAAC GACGGCAACA TGGTCGTCCG GGACAGCACA CTGGTCGACA ACCACGCGTA CGGCCGGGAG GGCAAGGGCG GGGGCCTGCT CAACAACGGG GTGCTGACCC TGCACTCCTC AACCTTCGAA GGCAACAGCG CCGCCGCGTA CGGTGGCGGG CTGGGCAACT ACCAGGCCGC AGCCGAGGTG CACACGAGTA CCTTCGAGCG GAATTCGGCG GCGCAGGGCG GCGGCCTGGC CAGCTTCTCG GCCCGTACCC GGGTCTCCGA CACGAAGGTC GTCGGCAACC GGGCGCAGAC CGGCGGTGGA ATCGCGAACT CGGACGCGCT GATCTTCCTG CGGGACATGG AGATCCGGGG CAACGTCGCC TCCGGCGACG GTGGCGGCGT CTCCAGCTTC CAGGGCCTTG TGCCGCTGGA CGACAGCGTG GTGGCGGGCA ACACCGCACA CGGCTCCGGT GGCGGCGTCT ACGCGGCCAA GTCGAACCTG CTGGTGCGGG ACAGCACGGT TCGGCACAAC GCCGCTGTCG GGGCGAGGTC CCACGGTGGC GGGCTCGCGG TCAGCATGGG CCGGGTCGCG CTCTACCGCA GTCTCGTCGC CGAGAATCGG TCGACCCTGC CGGCCGGTGG TCTGGACGTG GACAAGGCCC AGGCCACTGT GGGCCCGAAG ACCGTGGTCG CGGAGAACCG GCCGTCCAAC TGTATGGGTA GCACCAGCCC GGTGCCGAAC TGCTTCCGGT AG
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Protein sequence | MSTYQDSQRP SWGRRRPGRL LAGGLVASGL VVGATGLVGV AGAAAAHHDR PSASENAYAA GDDSARDRGW ERRAAPVPCD SAKLIAALVR VNAEGGGALR LAPRCTYTLT DAFHQPDAYD GGIRDAREAA DAAENPGQAE KPPRNPADDK AGLPVIYHPV IIEGEHATIE RRRDAEDFRF FTVRDAGELT LRNVTLVGGR SAAEGGAVHV VHGASAVIER VTALHNTSYS AEGGGGALFN DGNMVVRDST LVDNHAYGRE GKGGGLLNNG VLTLHSSTFE GNSAAAYGGG LGNYQAAAEV HTSTFERNSA AQGGGLASFS ARTRVSDTKV VGNRAQTGGG IANSDALIFL RDMEIRGNVA SGDGGGVSSF QGLVPLDDSV VAGNTAHGSG GGVYAAKSNL LVRDSTVRHN AAVGARSHGG GLAVSMGRVA LYRSLVAENR STLPAGGLDV DKAQATVGPK TVVAENRPSN CMGSTSPVPN CFR
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