| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2695 |
|---|
| Symbol | |
|---|
| ID | 5708369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 3069107 |
|---|
| End bp | 3070558 |
|---|
| Gene Length | 1452 bp |
|---|
| Protein Length | 483 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641272153 |
|---|
| Product | polymorphic membrane protein |
|---|
| Protein accession | YP_001537523 |
|---|
| Protein GI | 159038270 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0661586 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000503026 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACGT ATCAGGACAG CCAGCGACCG TCGTGGGGCC GGCGACGGCC CGGACGGCTG
CTCGCCGGCG GGCTGGTGGC CAGCGGCCTG GTCGTCGGAG CGACGGGGCT GGTCGGCGTT
GCCGGCGCGG CCGCGGCCCA CCACGACCGG CCATCCGCCA GCGAGAACGC GTACGCGGCT
GGGGACGACT CCGCCCGCGA CCGCGGCTGG GAACGCAGGG CGGCGCCGGT ACCCTGTGAC
AGCGCCAAGC TGATCGCCGC GCTGGTCCGG GTCAACGCCG AGGGCGGCGG GGCGCTGCGG
CTCGCGCCGA GGTGCACCTA CACGCTCACC GATGCTTTCC ACCAGCCCGA CGCCTACGAC
GGCGGGATCC GTGACGCGCG GGAAGCGGCG GACGCGGCCG AAAACCCCGG CCAGGCCGAG
AAACCGCCCC GCAACCCGGC CGACGACAAG GCGGGGTTGC CGGTCATCTA CCACCCGGTG
ATCATCGAGG GTGAGCACGC CACGATCGAG CGTCGTCGCG ATGCTGAGGA CTTCCGCTTC
TTCACCGTCC GCGACGCTGG TGAACTGACG CTGCGTAACG TCACGCTCGT CGGCGGTCGC
TCCGCCGCCG AGGGTGGTGC CGTCCACGTG GTGCACGGCG CATCGGCCGT GATCGAGCGG
GTCACGGCGC TGCACAACAC CTCGTACTCG GCGGAGGGTG GCGGCGGTGC GCTGTTCAAC
GACGGCAACA TGGTCGTCCG GGACAGCACA CTGGTCGACA ACCACGCGTA CGGCCGGGAG
GGCAAGGGCG GGGGCCTGCT CAACAACGGG GTGCTGACCC TGCACTCCTC AACCTTCGAA
GGCAACAGCG CCGCCGCGTA CGGTGGCGGG CTGGGCAACT ACCAGGCCGC AGCCGAGGTG
CACACGAGTA CCTTCGAGCG GAATTCGGCG GCGCAGGGCG GCGGCCTGGC CAGCTTCTCG
GCCCGTACCC GGGTCTCCGA CACGAAGGTC GTCGGCAACC GGGCGCAGAC CGGCGGTGGA
ATCGCGAACT CGGACGCGCT GATCTTCCTG CGGGACATGG AGATCCGGGG CAACGTCGCC
TCCGGCGACG GTGGCGGCGT CTCCAGCTTC CAGGGCCTTG TGCCGCTGGA CGACAGCGTG
GTGGCGGGCA ACACCGCACA CGGCTCCGGT GGCGGCGTCT ACGCGGCCAA GTCGAACCTG
CTGGTGCGGG ACAGCACGGT TCGGCACAAC GCCGCTGTCG GGGCGAGGTC CCACGGTGGC
GGGCTCGCGG TCAGCATGGG CCGGGTCGCG CTCTACCGCA GTCTCGTCGC CGAGAATCGG
TCGACCCTGC CGGCCGGTGG TCTGGACGTG GACAAGGCCC AGGCCACTGT GGGCCCGAAG
ACCGTGGTCG CGGAGAACCG GCCGTCCAAC TGTATGGGTA GCACCAGCCC GGTGCCGAAC
TGCTTCCGGT AG
|
|---|
| Protein sequence | MSTYQDSQRP SWGRRRPGRL LAGGLVASGL VVGATGLVGV AGAAAAHHDR PSASENAYAA
GDDSARDRGW ERRAAPVPCD SAKLIAALVR VNAEGGGALR LAPRCTYTLT DAFHQPDAYD
GGIRDAREAA DAAENPGQAE KPPRNPADDK AGLPVIYHPV IIEGEHATIE RRRDAEDFRF
FTVRDAGELT LRNVTLVGGR SAAEGGAVHV VHGASAVIER VTALHNTSYS AEGGGGALFN
DGNMVVRDST LVDNHAYGRE GKGGGLLNNG VLTLHSSTFE GNSAAAYGGG LGNYQAAAEV
HTSTFERNSA AQGGGLASFS ARTRVSDTKV VGNRAQTGGG IANSDALIFL RDMEIRGNVA
SGDGGGVSSF QGLVPLDDSV VAGNTAHGSG GGVYAAKSNL LVRDSTVRHN AAVGARSHGG
GLAVSMGRVA LYRSLVAENR STLPAGGLDV DKAQATVGPK TVVAENRPSN CMGSTSPVPN
CFR
|
|---|
| |