Gene Sare_2695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2695 
Symbol 
ID5708369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3069107 
End bp3070558 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content71% 
IMG OID641272153 
Productpolymorphic membrane protein 
Protein accessionYP_001537523 
Protein GI159038270 
COG category 
COG ID 
TIGRFAM ID[TIGR01376] Chlamydial polymorphic outer membrane protein repeat 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0661586 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000503026 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCACGT ATCAGGACAG CCAGCGACCG TCGTGGGGCC GGCGACGGCC CGGACGGCTG 
CTCGCCGGCG GGCTGGTGGC CAGCGGCCTG GTCGTCGGAG CGACGGGGCT GGTCGGCGTT
GCCGGCGCGG CCGCGGCCCA CCACGACCGG CCATCCGCCA GCGAGAACGC GTACGCGGCT
GGGGACGACT CCGCCCGCGA CCGCGGCTGG GAACGCAGGG CGGCGCCGGT ACCCTGTGAC
AGCGCCAAGC TGATCGCCGC GCTGGTCCGG GTCAACGCCG AGGGCGGCGG GGCGCTGCGG
CTCGCGCCGA GGTGCACCTA CACGCTCACC GATGCTTTCC ACCAGCCCGA CGCCTACGAC
GGCGGGATCC GTGACGCGCG GGAAGCGGCG GACGCGGCCG AAAACCCCGG CCAGGCCGAG
AAACCGCCCC GCAACCCGGC CGACGACAAG GCGGGGTTGC CGGTCATCTA CCACCCGGTG
ATCATCGAGG GTGAGCACGC CACGATCGAG CGTCGTCGCG ATGCTGAGGA CTTCCGCTTC
TTCACCGTCC GCGACGCTGG TGAACTGACG CTGCGTAACG TCACGCTCGT CGGCGGTCGC
TCCGCCGCCG AGGGTGGTGC CGTCCACGTG GTGCACGGCG CATCGGCCGT GATCGAGCGG
GTCACGGCGC TGCACAACAC CTCGTACTCG GCGGAGGGTG GCGGCGGTGC GCTGTTCAAC
GACGGCAACA TGGTCGTCCG GGACAGCACA CTGGTCGACA ACCACGCGTA CGGCCGGGAG
GGCAAGGGCG GGGGCCTGCT CAACAACGGG GTGCTGACCC TGCACTCCTC AACCTTCGAA
GGCAACAGCG CCGCCGCGTA CGGTGGCGGG CTGGGCAACT ACCAGGCCGC AGCCGAGGTG
CACACGAGTA CCTTCGAGCG GAATTCGGCG GCGCAGGGCG GCGGCCTGGC CAGCTTCTCG
GCCCGTACCC GGGTCTCCGA CACGAAGGTC GTCGGCAACC GGGCGCAGAC CGGCGGTGGA
ATCGCGAACT CGGACGCGCT GATCTTCCTG CGGGACATGG AGATCCGGGG CAACGTCGCC
TCCGGCGACG GTGGCGGCGT CTCCAGCTTC CAGGGCCTTG TGCCGCTGGA CGACAGCGTG
GTGGCGGGCA ACACCGCACA CGGCTCCGGT GGCGGCGTCT ACGCGGCCAA GTCGAACCTG
CTGGTGCGGG ACAGCACGGT TCGGCACAAC GCCGCTGTCG GGGCGAGGTC CCACGGTGGC
GGGCTCGCGG TCAGCATGGG CCGGGTCGCG CTCTACCGCA GTCTCGTCGC CGAGAATCGG
TCGACCCTGC CGGCCGGTGG TCTGGACGTG GACAAGGCCC AGGCCACTGT GGGCCCGAAG
ACCGTGGTCG CGGAGAACCG GCCGTCCAAC TGTATGGGTA GCACCAGCCC GGTGCCGAAC
TGCTTCCGGT AG
 
Protein sequence
MSTYQDSQRP SWGRRRPGRL LAGGLVASGL VVGATGLVGV AGAAAAHHDR PSASENAYAA 
GDDSARDRGW ERRAAPVPCD SAKLIAALVR VNAEGGGALR LAPRCTYTLT DAFHQPDAYD
GGIRDAREAA DAAENPGQAE KPPRNPADDK AGLPVIYHPV IIEGEHATIE RRRDAEDFRF
FTVRDAGELT LRNVTLVGGR SAAEGGAVHV VHGASAVIER VTALHNTSYS AEGGGGALFN
DGNMVVRDST LVDNHAYGRE GKGGGLLNNG VLTLHSSTFE GNSAAAYGGG LGNYQAAAEV
HTSTFERNSA AQGGGLASFS ARTRVSDTKV VGNRAQTGGG IANSDALIFL RDMEIRGNVA
SGDGGGVSSF QGLVPLDDSV VAGNTAHGSG GGVYAAKSNL LVRDSTVRHN AAVGARSHGG
GLAVSMGRVA LYRSLVAENR STLPAGGLDV DKAQATVGPK TVVAENRPSN CMGSTSPVPN
CFR