Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2687 |
Symbol | |
ID | 5706770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3060992 |
End bp | 3062368 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641272145 |
Product | carbamoyl-phosphate synthase L chain ATP-binding |
Protein accession | YP_001537515 |
Protein GI | 159038262 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.125716 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000597874 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTTCAGCA AAGTGCTCAT CGCCAACCGG GGCGAGATCG CGCTGCGAGT GCTGCGGGCC TGCCGCGAGC TGGGAATTCG AACCGCGGTG GTGTACTCCA CGGCGGACGC TGACTCGGCC GCGGTGCGGC TCGCCGACGA GTCGGTCCTG ATCGGACCGG CGGCGAGTCG CCGCAGCTAC CTGAACCCGG CGGCCATCGT CGAGGCTGCC CGCCTGGTCG GTGCGCAGGC GGTGCACCCC GGCTACGGCT TCCTCTCCGA AGACGCCGAC TTCGCCGAGA TCTGTGCCGA CAACGGCCTC GTCTTCGTCG GTCCGCCACC CCAGGTGATG GCCGCGTTGG CTGACAAGTC GTCCGCGCGG GCGCTGATGA GCCGCGCCGG CCTGCCGCTG CCACCGGGCA GCGTCGCACC GGTGCCGACC GCTGCCGACG CCGCCCGGGT TGCCGCCGAG GTGGGCTACC CGGTGATCGT GAAGGCCGCC GCTGGGGGCG GTGGCCGGGG GATGACCGTG GTGTCCACAC CGACCGAACT GCCCCGGGCG TACGCCCGGA CCCGAGCCGC CGCCCAGATC GCGTTTGGCG ACGACCGGGT ATACGTCGAG CGGTACCTCG GCAGCGCGCG GCACGTCGAG GTGCAGGTGC TCTGCGATGC CCACGGCAAC GGTGTGCACC TGGGCACCCG GGATTGTTCG GTGCAGCGCC GACACCAGAA GCTCGTCGAG GAGGCGCCCG CTCCGGCACT GTCGGCGGCC ACCCTGGACG CTATCGCCAG TGGCGCCCTC CGCGGCGCAC TGGACGTCGG GTTCACCGGT GCCGGAACAG TGGAATTCCT GGTTGATTCA GCGGAACAGT TCCACTTCCT GGAGATCAAC TGTCGGATTC AGGTGGAGCA TCCGGTCACC GAGATGATCA CCGGTATCGA CCTCGTGCAC GAGCAACTAC GCCTGGCGGC CGGCCGGACG CTGCGGTGGC GGCAGGAGGA GATCGTGACC AACGGCGTGG CGGTCGAGTG CCGGGTCAAC GTCGAGGACC CCGATCGGGG CTTCGCGCCG ACGCCCGGCC GCCTGGAGCG GTTCGTCCCT CCGGGTGGCC CGTTCACCCG GGTCGACACG CACGGGTACC CCGGCTACGT CGTCGGCCCC CACTACGACT CCCTGTTGGC CAAGGTGGCG GTGTGGGCTC CAGACCGGGA ACTGGCCCTC AACCGACTGG AACGCGCCCT CGACGAGTTC GAGGTCGCTG GCCCGGGCGT GCACACCACC ATCCCGTTCG TCCGGCGGGT GCTCGACGAC GCCGGGTTCC GCAAGGGCCG TCACTGCACC GGTCTGGTCG AGACGTTGCT CGCCGACCTG CCCAAGCAAT CGAGGAGGAA CGCATGA
|
Protein sequence | MFSKVLIANR GEIALRVLRA CRELGIRTAV VYSTADADSA AVRLADESVL IGPAASRRSY LNPAAIVEAA RLVGAQAVHP GYGFLSEDAD FAEICADNGL VFVGPPPQVM AALADKSSAR ALMSRAGLPL PPGSVAPVPT AADAARVAAE VGYPVIVKAA AGGGGRGMTV VSTPTELPRA YARTRAAAQI AFGDDRVYVE RYLGSARHVE VQVLCDAHGN GVHLGTRDCS VQRRHQKLVE EAPAPALSAA TLDAIASGAL RGALDVGFTG AGTVEFLVDS AEQFHFLEIN CRIQVEHPVT EMITGIDLVH EQLRLAAGRT LRWRQEEIVT NGVAVECRVN VEDPDRGFAP TPGRLERFVP PGGPFTRVDT HGYPGYVVGP HYDSLLAKVA VWAPDRELAL NRLERALDEF EVAGPGVHTT IPFVRRVLDD AGFRKGRHCT GLVETLLADL PKQSRRNA
|
| |