Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2667 |
Symbol | |
ID | 5706978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 3042390 |
End bp | 3043094 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641272125 |
Product | GDSL family lipase |
Protein accession | YP_001537495 |
Protein GI | 159038242 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.24646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000175501 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAGCGA CGCTCAACGA AGCCACCGAT CCCTACTGCC TTCGAGCGGA GGAGAGTGGC ACCCTGCTAC GGGGCCATCC GTGGCGACGC TTCGCGGTGC TGGGCGACAG TGTCGCGGAA GGGCTCTGCG AGCCGGTTGA CGGATACCCG GATGTGCAGT TGGCCGACCG GATAGCCGCC GAGCTGCGCG CCACCGCACC CGATCTTGCC TACCTCAATC TCGGGCTGCG CGGGCTGCGG GCACACCAGG TCAGGGCCAG CCAGCTCGGC CCGGCACTGG AGTTCGGACC GGATCTCGCC CTGGTCGTGT GCGGCGGCAA CGACGCGTTC CGGCCGGGCT ACGACGCCGA GGCGGTGGAC GCGGAGATCA CCGCGATGGT CCAGGCGCTG CAGAACGCCG GGGCGACGGT CATCACGGTG GGAATGTTCG ACGTGTCGTA CAGCCCGGCG GTGCCCGAGC CGCACCGCGC CGGCCTCGGC GTGCGGATGC GCCGGCTGGC CGAGCACACC CGCGCGGTCG CCCACCGCCT GGGCACGGTC CACGTGCACC TGACCGACCA TCCGCTGACC GCCGACCCGT CCATCTACAG CGGCGACGGC CGCCACGGAA GTGCCCGCAG CGACGCCATC GCCGCGGCCG AGACCCTCCG CCGCCTCGCG CACCACCTCG ACCCGGTCGA CACCGACCGG GCCGAGGGCC GCTGA
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Protein sequence | MAATLNEATD PYCLRAEESG TLLRGHPWRR FAVLGDSVAE GLCEPVDGYP DVQLADRIAA ELRATAPDLA YLNLGLRGLR AHQVRASQLG PALEFGPDLA LVVCGGNDAF RPGYDAEAVD AEITAMVQAL QNAGATVITV GMFDVSYSPA VPEPHRAGLG VRMRRLAEHT RAVAHRLGTV HVHLTDHPLT ADPSIYSGDG RHGSARSDAI AAAETLRRLA HHLDPVDTDR AEGR
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