Gene Sare_2628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2628 
Symbol 
ID5706891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2994153 
End bp2994968 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content73% 
IMG OID641272088 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001537458 
Protein GI159038205 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.2401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGATCT GGTCCCGTAG CGCCCGCTGG CCCGTCTGGG CACTGTTCGC CGCCGTCTTC 
CTGGTGATCG TGGTAGCACC GCTGGCCGTG CTGGTGGCTG CCGCCCTGGC CGCGGAGTGG
AACGACGTCC TGCCCGGCGC CTTCACCACC GCCCACCTGG GTGCCGCCCT GACCGGCGAG
AACCAGGCCA GCCTCCTCGT CAGCCTGCAG ACCGCGGCTG TCGCCGGGCT GGCCGCCGTG
GCCGTCGGCA CCTGGGCGGC GCTCGCACTC GCCGTGGCAC CCCGCTGGCT GCGCAGAGGT
GCCGACGCGC TCCTGCACCT ACCGGTCGCC ATCCCGTCGG TGGTGGTCGG GCTCGGGCTG
CTGGTCGCCT ACAGCCGGCC GCCGCTGCTG CTCAACGGCA CGCGGTGGAT CGTGCTGATC
GCCCACGTGG TGCTCGTCCT GGCCTTCTCC TACGCCACCG TGTCCAGCGC GCTGACCCGT
ATCGACGGTT CGTACGCCCA GGTCGCCGCA TCGCTGGGGG CGCGGCCCGC GCTGGTGCTC
TGGCGGGTCC GCCTGCCGAT GCTGCTGCCG GCCATGTCGG CCGCCGCGGC ACTCGCGATC
GCGTTGTCGA TGGGCGAGGT CGGCGCGACG ATCATGGTGT ACCCGCCGGA CTGGCGCACG
TTGCCGGTCA CCGTCTTCAC CCTGACCGAC CGGGGCCGTA CGTTCGACGC GGCGGCGGCC
ACGCTGATCC TGCTCGGCAC GACGCTGGTG GCGTTGCTGG TTCTCGGCCG GATATCCCGT
GGCCGGGCTG GTGGACGCCG GGCGCAGGCT GGTTGA
 
Protein sequence
MLIWSRSARW PVWALFAAVF LVIVVAPLAV LVAAALAAEW NDVLPGAFTT AHLGAALTGE 
NQASLLVSLQ TAAVAGLAAV AVGTWAALAL AVAPRWLRRG ADALLHLPVA IPSVVVGLGL
LVAYSRPPLL LNGTRWIVLI AHVVLVLAFS YATVSSALTR IDGSYAQVAA SLGARPALVL
WRVRLPMLLP AMSAAAALAI ALSMGEVGAT IMVYPPDWRT LPVTVFTLTD RGRTFDAAAA
TLILLGTTLV ALLVLGRISR GRAGGRRAQA G