Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2628 |
Symbol | |
ID | 5706891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 2994153 |
End bp | 2994968 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641272088 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001537458 |
Protein GI | 159038205 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.2401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGATCT GGTCCCGTAG CGCCCGCTGG CCCGTCTGGG CACTGTTCGC CGCCGTCTTC CTGGTGATCG TGGTAGCACC GCTGGCCGTG CTGGTGGCTG CCGCCCTGGC CGCGGAGTGG AACGACGTCC TGCCCGGCGC CTTCACCACC GCCCACCTGG GTGCCGCCCT GACCGGCGAG AACCAGGCCA GCCTCCTCGT CAGCCTGCAG ACCGCGGCTG TCGCCGGGCT GGCCGCCGTG GCCGTCGGCA CCTGGGCGGC GCTCGCACTC GCCGTGGCAC CCCGCTGGCT GCGCAGAGGT GCCGACGCGC TCCTGCACCT ACCGGTCGCC ATCCCGTCGG TGGTGGTCGG GCTCGGGCTG CTGGTCGCCT ACAGCCGGCC GCCGCTGCTG CTCAACGGCA CGCGGTGGAT CGTGCTGATC GCCCACGTGG TGCTCGTCCT GGCCTTCTCC TACGCCACCG TGTCCAGCGC GCTGACCCGT ATCGACGGTT CGTACGCCCA GGTCGCCGCA TCGCTGGGGG CGCGGCCCGC GCTGGTGCTC TGGCGGGTCC GCCTGCCGAT GCTGCTGCCG GCCATGTCGG CCGCCGCGGC ACTCGCGATC GCGTTGTCGA TGGGCGAGGT CGGCGCGACG ATCATGGTGT ACCCGCCGGA CTGGCGCACG TTGCCGGTCA CCGTCTTCAC CCTGACCGAC CGGGGCCGTA CGTTCGACGC GGCGGCGGCC ACGCTGATCC TGCTCGGCAC GACGCTGGTG GCGTTGCTGG TTCTCGGCCG GATATCCCGT GGCCGGGCTG GTGGACGCCG GGCGCAGGCT GGTTGA
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Protein sequence | MLIWSRSARW PVWALFAAVF LVIVVAPLAV LVAAALAAEW NDVLPGAFTT AHLGAALTGE NQASLLVSLQ TAAVAGLAAV AVGTWAALAL AVAPRWLRRG ADALLHLPVA IPSVVVGLGL LVAYSRPPLL LNGTRWIVLI AHVVLVLAFS YATVSSALTR IDGSYAQVAA SLGARPALVL WRVRLPMLLP AMSAAAALAI ALSMGEVGAT IMVYPPDWRT LPVTVFTLTD RGRTFDAAAA TLILLGTTLV ALLVLGRISR GRAGGRRAQA G
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