Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2598 |
Symbol | |
ID | 5707892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 2962572 |
End bp | 2962946 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641272060 |
Product | PilT domain-containing protein |
Protein accession | YP_001537430 |
Protein GI | 159038177 |
COG category | [S] Function unknown |
COG ID | [COG3744] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0709656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0156021 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTGT TGTTGGACAC CCACGTCGTG CTGTGGGCCA TCACCGGGGA TGCGAATCTG GGCCCGGCAT TTCTCGATCG GCTCCGTCGT GACCCGGACA TCTACCTTTC TCCGGTCACC CTCTGGGAGA TCACCGTCAA GCAGACGGCG GGCAAGCTCG CCGGACCGTC CGACCTCGCG GAGCGGGTCC GGGACATGGG CTTTCGTGAA CTGGCGGTGA CGCACGCCCA CGCGATCGCC GCCGGGCGCC TCCCGCTTCA CCACCGCGAT CCCTTCGACC GGATGTTGGT GGCGCAGGCA ACCGTGGAAG GCATGACGTT GGCCTCCCGC GACGCGTCGA TCGCGCGGTA CGACGTGGAC GTGCTCAAGG TCTGA
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Protein sequence | MSLLLDTHVV LWAITGDANL GPAFLDRLRR DPDIYLSPVT LWEITVKQTA GKLAGPSDLA ERVRDMGFRE LAVTHAHAIA AGRLPLHHRD PFDRMLVAQA TVEGMTLASR DASIARYDVD VLKV
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