| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2589 |
|---|
| Symbol | |
|---|
| ID | 5707174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 2950106 |
|---|
| End bp | 2951719 |
|---|
| Gene Length | 1614 bp |
|---|
| Protein Length | 537 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641272051 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001537421 |
|---|
| Protein GI | 159038168 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03605] SagB-type dehydrogenase domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0423242 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.130609 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCCG AGAACCCCGG CCTCGCCCAC GCGTACGCGA CCGCGATCCT GCGGCGCGGC
CGTGAACCGA TGCCCCCGGC AGACTTCACG CCCAACTGGG CCGACGCGCC CCGCCGCGGC
AAGTACTACC CGCGGGCGAG CGCCTTCGGG CTGCCCGCCC CGCCGAGCGC CGGCGTCGAC
CTGGACGCCG CGCTGCACGG CCCCGGCGAC GCCGACGAGC CGTTCACGCT GCCGCTGCTG
GCCGGCCTGC TCCATCACTC GTACGGGCTG CTCGGACGGC GGCTCGGCAT CCAGGCCAAC
TCCGATCTGG GAGTGCTGCC GTCGTACGCG TACGCCAACT GGCACCGCGG CGCCGCCTCC
GGTGGAGGTC TCTACCCGTG CAGCGTCTAC TGGGTCGCCG GGCCCGGCGC CGGGGTCACC
CCTGGGGTCT ACTACTACGC CCACGCCCGG CACGCGATGC AGCGGCTGCT CGGCGGCGAC
GTCAGCGCTC GGGTGAACGC GGCGGTCGCC CCACCCCACC CCGCCAGCCA GTTTCTGATC
GTCGGGGTGA AGTACTGGCA GAACGCCTTC AAGTACAACA ACTTCTCGTA CCACGTGGTG
TCGATGGACC TGGGTACGCT GCTGCAGTCA TGGCGGCTCT GGGCCGGCGC CCAGGGCCGA
CAGATCCGGC CCGTGCTCTG GTTCGATCAG GCGGCCGTCG CCGACCTGCT CGGGCTCGCC
CCCGACGATG AGACACTCTT CGCCGCCGTA CCCCTGACCT GGGCCGCGCC CGCCGCCCCC
GCGGCCCTGG CGCCCACGTC CGCCCCCACC CGTCGAAGGG AGCCGGCGAC GGTCCGGGTA
CGACACCGCG ACCAGGAGCG GTCCCAGACG CTGCTCACCT TCGACACGCT GCGGCAGGTC
AGCCGCAGCA CCGCCGCGTC GGTCGACCGG CCCGCTACCG GGGCGCTGGC ACCCGCCGCC
GCCCACCCGA CGCCGCCGGG CGGAACCCGC CTACCGCTAC CCGCCGCCGC GCCGCTGACG
CTGTCCGTCG AGGCCGCCCT CACCGCCCGC CGCAGCAGCT TCGGCCGGTT CCTGCACAAT
CGTCCGATGG CGGCGGAGCA GCTCGCCGCG CTGCTGCGGG CCACCACCGC CAGCACCGTG
CCATCCGAGA TCGACGGACC CGCAGACCGT CCGCTGACCC GGATCTACGC CTTCGTCAAC
GCCGTGGCCA ACGTGCCCGC CGGGGGATAC GTGTACGACC CGCAGGAGCA CAGCCTGGTC
GCCGTCACCA GTGGCCCACC AGGGGCATTC CTGCAACGCA ACTACACCCT GGCCAACTAC
AACCTGGAGC AGGCAGCGGT CGTGCTCGTC CTGACGGTGC GCACACACGC GGTGCTGGAC
GCCACCGGCG ACCGAGGCTA CAACCTCGTC AACGCCACCA TCGGCGCGAT GGCCCAGACC
TTCTACACTG TCGCCGCCGC ACTGCACCTC GGCGCGGGGG TCGCACTGGG CTTCGACGGC
ATCTCCTACG TCGAGGAGCT GGGACTCGCC GACAGCGACG AGTTCCCGCT GCTCATCATG
CTCGCCGGCG AGGAACGCGG ACAGCTCGGC GACTACCGAT ACGAGCTGCG GTGA
|
|---|
| Protein sequence | MTSENPGLAH AYATAILRRG REPMPPADFT PNWADAPRRG KYYPRASAFG LPAPPSAGVD
LDAALHGPGD ADEPFTLPLL AGLLHHSYGL LGRRLGIQAN SDLGVLPSYA YANWHRGAAS
GGGLYPCSVY WVAGPGAGVT PGVYYYAHAR HAMQRLLGGD VSARVNAAVA PPHPASQFLI
VGVKYWQNAF KYNNFSYHVV SMDLGTLLQS WRLWAGAQGR QIRPVLWFDQ AAVADLLGLA
PDDETLFAAV PLTWAAPAAP AALAPTSAPT RRREPATVRV RHRDQERSQT LLTFDTLRQV
SRSTAASVDR PATGALAPAA AHPTPPGGTR LPLPAAAPLT LSVEAALTAR RSSFGRFLHN
RPMAAEQLAA LLRATTASTV PSEIDGPADR PLTRIYAFVN AVANVPAGGY VYDPQEHSLV
AVTSGPPGAF LQRNYTLANY NLEQAAVVLV LTVRTHAVLD ATGDRGYNLV NATIGAMAQT
FYTVAAALHL GAGVALGFDG ISYVEELGLA DSDEFPLLIM LAGEERGQLG DYRYELR
|
|---|
| |