| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2575 |
|---|
| Symbol | |
|---|
| ID | 5706147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 2932015 |
|---|
| End bp | 2933178 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641272038 |
|---|
| Product | CRISPR-associated Cse4 family protein |
|---|
| Protein accession | YP_001537408 |
|---|
| Protein GI | 159038155 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01869] CRISPR system CASCADE complex protein CasC/Cse4 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0107855 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCCGGA CCATCCTGGA CATCCACATT CTGCACACGC TGCCGCCGAG CAACGTCAAC
CGGGACGACT CCGGCTCCCC CAAGAGCGCC ACCTACGGCG GGGTCCGCCG GGCCCGAGTC
TCGTCCCAGT CGTGGAAGCG CGCAGTACGG CTGGCATTCG CCGACTCGCT CGACGATACC
CAGCTCGGCG AGCGCACCAA ACGCGTCGGG GAAGCTGTCG CCGCCCGGAT CGCCGACCTC
GACCCCGAGC TGAAGGACAA GGCGTCCGCC CTTGCCGCGG AGGTCCTCAA GACCGCCGGC
CTGGTGAAGA AGGAGGCAGC GGCCAAGAAG GTGGCGGCGA ACAAGAGCAA GGAGCCGGCG
CAGAGCACCG ATGTCGAGTC CGGCTACCTG CTCTTTCTCA GCCACCGACA GCAGGAGAAC
CTGGCTCAGG CCGCGATCGA GGCCGAGCGG ACCGGCGCGA AACTCGATGC CAAGAACCTT
CAGAGACTGG CCGACACCGA CCACTCCATC GACATCGCCA TGTTCGGCCG GATGCTCGCC
GACGTGCCCG ACCTCAACGT CGACGCCGCC GTGCAGGTCG CCCACGCCCT CAGCGTGCAC
GCCGTGGACA ACGAGTTCGA CTACTACACC GCTGTCGACG ACCGTAAGCA CGACAACCAG
GAGACCGGTG CCGGCATGAT CGGCACGATC GAGTTCAACT CGTCGACGCT CTACCGGTAC
GCCACCGTCG ACGTCGACCG GCTACACGAC ACCCTCGGCG ACACCGCCGC CACCGGTCAG
GCCGTGAAGG CCTTCCTGCT CGCCTTCACC ACCAGCATGC CGTCCGGCAA GCGGAACACC
TTCGCCAACG GCACCCGCCC CGACGCGGTC ATGGTGCGGC TGCGCGACAC CCAGTCCGTC
AACCTGGTCG GCGCTTTCGA GGAACCGGTT CGGGAGAGGC AGTTCGGCGA CAGATCCGGC
GTGGTCGGCG CCGCCGCCGA GAAGCTCGCC GAGCACACCG CCGAGGTCGA GGGGGCGTAT
GGGGATCCCG CCGTCGCCGC CTGGGTGACC CACGTCGGCA GCCGTACCGC CGCGCTGGCC
GCCCTCGGCG AGGTGCTGCC GCTGCCCGGA CTGGTCGACG CCGTCGGGGT CGCGATCACC
GACCGCCTCG GTACGCCAGC ATGA
|
|---|
| Protein sequence | MTRTILDIHI LHTLPPSNVN RDDSGSPKSA TYGGVRRARV SSQSWKRAVR LAFADSLDDT
QLGERTKRVG EAVAARIADL DPELKDKASA LAAEVLKTAG LVKKEAAAKK VAANKSKEPA
QSTDVESGYL LFLSHRQQEN LAQAAIEAER TGAKLDAKNL QRLADTDHSI DIAMFGRMLA
DVPDLNVDAA VQVAHALSVH AVDNEFDYYT AVDDRKHDNQ ETGAGMIGTI EFNSSTLYRY
ATVDVDRLHD TLGDTAATGQ AVKAFLLAFT TSMPSGKRNT FANGTRPDAV MVRLRDTQSV
NLVGAFEEPV RERQFGDRSG VVGAAAEKLA EHTAEVEGAY GDPAVAAWVT HVGSRTAALA
ALGEVLPLPG LVDAVGVAIT DRLGTPA
|
|---|
| |