Gene Sare_2563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2563 
Symbol 
ID5708429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2918812 
End bp2919222 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content67% 
IMG OID641272026 
Producthypothetical protein 
Protein accessionYP_001537396 
Protein GI159038143 
COG category[S] Function unknown 
COG ID[COG4828] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0394513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000227109 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAGGACA TGCTCGGCGA GCACTGGTTG TTGGAGGCGG TGGACCTCCT GGTGCGGGTG 
GTGGAGGCCG CCGGCATCTT CATCATCTTC ATCGGGGCGA TGCTGGCATT CGTCCGGTTC
GTGTTCGTGG GTCTACGGCA CCGAGAAAGC CGGGTGTTCG TGCCGATCCG GCTGACTCTC
GGGCGGTTCC TGACCCTCGG CCTGGAGTTT CAACTCGCCT CGGACATCTT GCGTACCGCG
GTCGCCCCGA CCCTGCTCGA CATCGCCGAG CTGGCCGGGG TGGCGGCGAT CCGGACCGCG
CTGAACTTCT TTCTGGCCCG TGAGATCAAG CAGGAGCGTC GTGAGATCGC CGAACTCGGC
CAGCCCCGGC GCACCGACCC GGACCGGGTG GCGCAGGAGC CCGCCCCGTG A
 
Protein sequence
MEDMLGEHWL LEAVDLLVRV VEAAGIFIIF IGAMLAFVRF VFVGLRHRES RVFVPIRLTL 
GRFLTLGLEF QLASDILRTA VAPTLLDIAE LAGVAAIRTA LNFFLAREIK QERREIAELG
QPRRTDPDRV AQEPAP