Gene Sare_2559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2559 
Symbol 
ID5708425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2914606 
End bp2915463 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content70% 
IMG OID641272022 
Productband 7 protein 
Protein accessionYP_001537392 
Protein GI159038139 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000166484 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGCCG GCTTCGTCGG TGGCGTGATC ACGGTGGCGG TGCTGGTGCT GCTGGGCGCC 
CTGAGCCTGC GGATCGTGCA GCAGTACCAG CGCGGGGTGG TCTTCCGGTT CGGACGGGTG
CTGCATCCCG TCCGGGAACC CGGACTGCGG CTGATCATCC CGGTCGTCGA CCGGATGGTC
CGGGTGAGTA TGCAGACCAC GGTCATCGAC GTGCCGGCAC AGGGCGCGAT CACGCGTGAC
AACGTGACTC TCAAGGTCGA CGCGGTGGTC TACTTCCGGG TCGTGGACCC GGTGAAGGCC
CTGGTGAACG TGAACCAGTA CCCGGCGGCG GTGCTGCAGA TCTCGCAGAC CGCCCTGCGG
TCGGTGATCG GCAAGGTGGA CCTGGACACG CTCCTCGCCG ACCGGGACAA GGTCAACGCC
GATCTCAAGT CGGTGATCGA CGCGCCGACC GAGGAGCCGT GGGGGCTGAA CATCGAGCGG
GTCGAGGTCA AGGACGTCTC GCTGCCGGAG GGAATGAAGC GGTCGATGTC CCGGCAGGCC
GAGGCCGAGC GGGATCGGCG GGCGCGAGTC ATCGCCGCCG ACGGTGAGTA CCAGGCGTCC
CGGCGGCTCG CCGACGCGTC CCAGACGATG GCGGACACCC CGGGCGCGTA CCAGCTGCGG
CTGCTACAGA CCGTGTCGGA CGTGGCGGCG GAGAAGAACA GCACCCTGGT GATGCCGTTC
CCGGTGGAAC TGCTGCGCTT CTTCGACAAG TACGCGCGGA ACGCCCCGAC CGGCCAGGGT
GAGGCGGTGG CGGAGCAGGC AGCCGCGGTG GCCGGTGACG GGCACCGCCG CGACGGCGGG
CCGCGTCCGG CCCGGTGA
 
Protein sequence
MAAGFVGGVI TVAVLVLLGA LSLRIVQQYQ RGVVFRFGRV LHPVREPGLR LIIPVVDRMV 
RVSMQTTVID VPAQGAITRD NVTLKVDAVV YFRVVDPVKA LVNVNQYPAA VLQISQTALR
SVIGKVDLDT LLADRDKVNA DLKSVIDAPT EEPWGLNIER VEVKDVSLPE GMKRSMSRQA
EAERDRRARV IAADGEYQAS RRLADASQTM ADTPGAYQLR LLQTVSDVAA EKNSTLVMPF
PVELLRFFDK YARNAPTGQG EAVAEQAAAV AGDGHRRDGG PRPAR