Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2526 |
Symbol | |
ID | 5703376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2883204 |
End bp | 2884094 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641271990 |
Product | UspA domain-containing protein |
Protein accession | YP_001537360 |
Protein GI | 159038107 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00294158 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAACTGGG TGAACTCGGC GAACGGCGCA GCAGTGGTGG TCGGCGTGGA CGGTTCCGAG CAGGCCCTGC GGGCAGTGCG CCTCGCGGCC ACCGAGGCCG CCAGACGGCA CCGCACACTA CGGGTCGTCC ACGGCTTCAT CTGGCCCCTA CTCCACGTAC CGGTGGGGGC ACCGGCCGGC GGACCCCCCG GTTCGGGCCT ACGCCAGCAG GCGGAGCAAC TCGTCGCCAC CGCAGTGGCC GAGGCCGAGG CGACCGCGCC CGGTCTTCAC GTGTCGGGCG AGATCATCGA CGGTGAAGCC GCCGCGGTAC TGCTCGGTGA GGCCCCAACG GCGGTACTGA TCGTGCTGGG TGACCGGGGC CTGGGCGGAT TCGCCACCCT CGTGGTCGGT TCCGTCGCGG TGCAGGTCGC CACCCACGCC GATTGCCCGG TGCTGGTCGC CCGAGGTGCT GACCGCGCCG AAGGGCCGGT GGTCGTCGGC GTGGACGGAT CGGTCCTGTC CCCTCCCGCC ATCGAGTTCG CCGCGGAGCA GGCGTCGCTG CGCGGCACCG ACCTCGTCGC GGTGCACGCC TACCTGCACC CGGTCTCCGG CGGTCCAGGT GACATGCAGC CGCTCGTCTA CGACGAGGAC AAGCTGCGCC ACGAGGAACA ACGGGTACTC GCCGAATCCG TCGCCGGACT CGGCGAGAGG TGGCCGGACG TGACCGTCCA CCAGCGAACC GCACGCGGCC GGCCCGGAAC GATCCTCACC GACATGTCCC AACAGGCCCA GCTACTGGTG GTCGGTGGGC ACGGACACGG CGCGGTCGCC GGCCTCCTGC TGGGCTCGGT CAGCCAGTCA GCGCTGCACC ACGCCGACTG CCCCGTCGCG GTTGTCCGTA CGCCACGCTG A
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Protein sequence | MNWVNSANGA AVVVGVDGSE QALRAVRLAA TEAARRHRTL RVVHGFIWPL LHVPVGAPAG GPPGSGLRQQ AEQLVATAVA EAEATAPGLH VSGEIIDGEA AAVLLGEAPT AVLIVLGDRG LGGFATLVVG SVAVQVATHA DCPVLVARGA DRAEGPVVVG VDGSVLSPPA IEFAAEQASL RGTDLVAVHA YLHPVSGGPG DMQPLVYDED KLRHEEQRVL AESVAGLGER WPDVTVHQRT ARGRPGTILT DMSQQAQLLV VGGHGHGAVA GLLLGSVSQS ALHHADCPVA VVRTPR
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