Gene Sare_2526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2526 
Symbol 
ID5703376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2883204 
End bp2884094 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content72% 
IMG OID641271990 
ProductUspA domain-containing protein 
Protein accessionYP_001537360 
Protein GI159038107 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00294158 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAACTGGG TGAACTCGGC GAACGGCGCA GCAGTGGTGG TCGGCGTGGA CGGTTCCGAG 
CAGGCCCTGC GGGCAGTGCG CCTCGCGGCC ACCGAGGCCG CCAGACGGCA CCGCACACTA
CGGGTCGTCC ACGGCTTCAT CTGGCCCCTA CTCCACGTAC CGGTGGGGGC ACCGGCCGGC
GGACCCCCCG GTTCGGGCCT ACGCCAGCAG GCGGAGCAAC TCGTCGCCAC CGCAGTGGCC
GAGGCCGAGG CGACCGCGCC CGGTCTTCAC GTGTCGGGCG AGATCATCGA CGGTGAAGCC
GCCGCGGTAC TGCTCGGTGA GGCCCCAACG GCGGTACTGA TCGTGCTGGG TGACCGGGGC
CTGGGCGGAT TCGCCACCCT CGTGGTCGGT TCCGTCGCGG TGCAGGTCGC CACCCACGCC
GATTGCCCGG TGCTGGTCGC CCGAGGTGCT GACCGCGCCG AAGGGCCGGT GGTCGTCGGC
GTGGACGGAT CGGTCCTGTC CCCTCCCGCC ATCGAGTTCG CCGCGGAGCA GGCGTCGCTG
CGCGGCACCG ACCTCGTCGC GGTGCACGCC TACCTGCACC CGGTCTCCGG CGGTCCAGGT
GACATGCAGC CGCTCGTCTA CGACGAGGAC AAGCTGCGCC ACGAGGAACA ACGGGTACTC
GCCGAATCCG TCGCCGGACT CGGCGAGAGG TGGCCGGACG TGACCGTCCA CCAGCGAACC
GCACGCGGCC GGCCCGGAAC GATCCTCACC GACATGTCCC AACAGGCCCA GCTACTGGTG
GTCGGTGGGC ACGGACACGG CGCGGTCGCC GGCCTCCTGC TGGGCTCGGT CAGCCAGTCA
GCGCTGCACC ACGCCGACTG CCCCGTCGCG GTTGTCCGTA CGCCACGCTG A
 
Protein sequence
MNWVNSANGA AVVVGVDGSE QALRAVRLAA TEAARRHRTL RVVHGFIWPL LHVPVGAPAG 
GPPGSGLRQQ AEQLVATAVA EAEATAPGLH VSGEIIDGEA AAVLLGEAPT AVLIVLGDRG
LGGFATLVVG SVAVQVATHA DCPVLVARGA DRAEGPVVVG VDGSVLSPPA IEFAAEQASL
RGTDLVAVHA YLHPVSGGPG DMQPLVYDED KLRHEEQRVL AESVAGLGER WPDVTVHQRT
ARGRPGTILT DMSQQAQLLV VGGHGHGAVA GLLLGSVSQS ALHHADCPVA VVRTPR